| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0299 |
|---|
| Symbol | |
|---|
| ID | 4570789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 329006 |
|---|
| End bp | 331756 |
|---|
| Gene Length | 2751 bp |
|---|
| Protein Length | 916 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639764898 |
|---|
| Product | DNA helicase |
|---|
| Protein accession | YP_910785 |
|---|
| Protein GI | 119356141 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.053033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTCAA GGCAAAACCT CGTCATCATC AAAGGCAAGG ATCGTACGGA TCAGATTTTG
CGAATCGGGG AAGCAACGGA ACAACGTATG ATCGTGACTT TCAGTAATGG AAAGCCGTAT
TTCTATGCCA GAGAAAACGT TGCATGGCTT TCGAATCCCG GTCGGATAAC AATCGATCAT
TGTCAGGTAC TGGTTGAAGG TGATTTGCTG TTCGATATCG AGGAGGTACT GCGTTTCGAA
ACCTGGGTGA AAATTTTTCG CAGGAATGGA GAAAGCCGGT GCTGCCTGTT TTCGGATTTT
TCCGTGCAGC GAATGTCCTC ATCAGATGGG CGCAGTACCG ATGTGCTTGC CTATTTCCGG
GAACTCGCCG AAACCACCGG ACTCATGACG AATGATAACA AGTCGATGAT GGCGATGAAA
TATCGGAACC TGGGTGTCGT TTCGGGTCGA AGTATCCTTT CGAGTTTTCT GCAGGCTCGT
CCTCCCGGTT CGGGTACGGT ACCGTCAGAT CTTATCTTTC CGTTTGGTTG CAATATGAGC
CAGAAAATGG CGGTACAAAG GGCGATCGAG CATCCCGTCT CCCTGATTCA GGGACCTCCG
GGAACCGGCA AAACCCAAAC CATCCTGAAC CTGATAGGCA ACATGCTGCT CCGGAGGAAA
CGGGTCGCTG TGGTCTCCAG CAACAACTCG GCTACAGCCA ATGTGCTGGA AAAGCTTCAG
AAATATGAAC TGGATTTCGT GGCAGCATCT CTCGGAAGCG CCGAGAACAA ACAGGTGTTT
ATCGAGGGGC AGTCATCCGA TGTCGTTCAG ATGCCGACGT TCCAGGCTGA TCAGGAAGCT
TCTGTTCTTC AGGAGATTTC CCTTCTGAAT ACTTCGCTTG ATAACGCATT TGCAGAGAAG
AACGGGTTGG CTGTCATAAT TCAGCAGATC GATGCTCTTA AGCTTGAAAT GGCTCACTTT
GAAAAGTACT GTGATGAAAC AAATGGCGGC GACTTGCGTG TGATCGATCG GGCGATGAAT
GCTGAATTAT CCGCACGGAA GCTGTTGCAT GCCTGGCTGG CTTCTGAAAA GGAATTAAAG
CGTTATGCAA AAGCGGGTGT TGCTTCGCCT TCTAACCGAC GTGTCGGTTT TCTGAAGAAG
ATCGGGTTTC TGCTCCGGTT TGGAACGGCA GGGAGCGCCT TTTTCGAGGT GAGCGTAAGG
GAACGGATTC CCCTGTTGCA GAAGGCCTAT TACCTGCGCA AGCTTGCCGA TATGGAACAA
AGGCGGAAAA CGCTTGAGGG ATCCCTTGCG GGATTCCATT TTGATGAACG GCTGGAAAGG
CTGACTGAAC TTTCGATGCA ACTGCTGAAG CACCGTCTTG CACAGCACTA CAACAACAGG
GAGCGGAGAA TATTCGCTCT TGAAGATCTC CGGAATCAGC CGGAAAAATT TCTTGAGGAA
TATCCGGTCA TACTCAGCAC AACGTTTTCC ATCATTACAT CGCTCAAGTC CGGCTATCTG
TTCGATTGCG TCATCGTTGA CGAGGCGAGT CAGGTCGATC TGCTGAGCGG CGTTCTTGCG
ATGGGTTGCG CAGAGAAGCT CGTCATCGTG GGTGATTCTA TGCAACTGCC CAATGTTTTG
ACGGCGCAGG ATGAAAAGCA GGCAAAAGAG GTTGCGTTAC AATACGATCT TCCGGATTAT
GCCAGGTTCG AGCGACATAA CCTGCTTTCT GCCGTGCGAA CTGCGTTCCC TGATATTCCG
GAGACGCTGT TGCTGGAGCA TTATCGGTGT CATCCGAAGA TCATTCAGTT CTGCAACCAG
AAGTTCTATG GTGGCGAACT GCTTGTAATG ACTCGCGATC AGGGCGAGGC GGACGTGCTC
AAGGCCTATA TGACCGTCGA GGGCCGCCAT GCGCGCGGTA CGATCAATCA GCGCCAGGTT
GATGAAATTA CACAGAATGT TTTGCCGGAA CTGGCCTCCA TCCATCCCGC TGACATAGGC
ATTGTTTCGC CATTCAGAGC GCAGGCGGAC CGGATGCTGT TATCTGTTGG GTCGAATGAG
ATCGGGATCG ATACGGTACA CAAGTATCAG GGCAGAGAAA AGCGGGCAAT AATTATCACA
ACCGTATCGA ACAAATCCAA CGAATTCGTC GATAATCCGA ATCTGCTGAA CGTTGCTGTA
TCCCGTGCGA AGGAGAAGCT CCGGCTGGTC GTTTCCATGG AGATGGCGGA TGGGAACAGC
AATGTCGCGG ATCTTGTCCG CTACATCCGG TACAACAATT GCGAGGTTAT ACCCGGCAGG
GTTCGTTCTG TCTTTGATCT TCTCTATCAA GACTACACGG CAGCACGTCT GGCGGTATTG
AAAAAGTGGA AACGGGTTTC GATATACGAT TCCGAGAATC TTGTCTACAG CGAGATAGAT
GCGGTACTTC AGGAGAAAGC TTATCGGGGG TTGGGTATCG TTTTTCAATT TCCGCTGTCG
ATGCTTGTTC GGAATAGAGA AAATCTGACC ACCGAAGAAT CCTCCTATGC GGCCCATCCA
TGGACTAAAA CCGATTTTCT GGTTTATCGT CGAGTCGATA AAAGTCCGGT GCTTGTTATT
GAAGTCGATG GATATGCATT TCATCGTGAA GGAACCCGTC AGGCGGAACG TGATGCGCTG
AAGGATGCCG TGTTGGAGAA ATGCGGTCTG CCCATACTGC GCCTTTCGAC AATCGGGAGC
GACGAGCGGA ACAGGATCAG GAAAAAGCTG GAGGATGTGG TTGCGTCATG A
|
|---|
| Protein sequence | MNSRQNLVII KGKDRTDQIL RIGEATEQRM IVTFSNGKPY FYARENVAWL SNPGRITIDH
CQVLVEGDLL FDIEEVLRFE TWVKIFRRNG ESRCCLFSDF SVQRMSSSDG RSTDVLAYFR
ELAETTGLMT NDNKSMMAMK YRNLGVVSGR SILSSFLQAR PPGSGTVPSD LIFPFGCNMS
QKMAVQRAIE HPVSLIQGPP GTGKTQTILN LIGNMLLRRK RVAVVSSNNS ATANVLEKLQ
KYELDFVAAS LGSAENKQVF IEGQSSDVVQ MPTFQADQEA SVLQEISLLN TSLDNAFAEK
NGLAVIIQQI DALKLEMAHF EKYCDETNGG DLRVIDRAMN AELSARKLLH AWLASEKELK
RYAKAGVASP SNRRVGFLKK IGFLLRFGTA GSAFFEVSVR ERIPLLQKAY YLRKLADMEQ
RRKTLEGSLA GFHFDERLER LTELSMQLLK HRLAQHYNNR ERRIFALEDL RNQPEKFLEE
YPVILSTTFS IITSLKSGYL FDCVIVDEAS QVDLLSGVLA MGCAEKLVIV GDSMQLPNVL
TAQDEKQAKE VALQYDLPDY ARFERHNLLS AVRTAFPDIP ETLLLEHYRC HPKIIQFCNQ
KFYGGELLVM TRDQGEADVL KAYMTVEGRH ARGTINQRQV DEITQNVLPE LASIHPADIG
IVSPFRAQAD RMLLSVGSNE IGIDTVHKYQ GREKRAIIIT TVSNKSNEFV DNPNLLNVAV
SRAKEKLRLV VSMEMADGNS NVADLVRYIR YNNCEVIPGR VRSVFDLLYQ DYTAARLAVL
KKWKRVSIYD SENLVYSEID AVLQEKAYRG LGIVFQFPLS MLVRNRENLT TEESSYAAHP
WTKTDFLVYR RVDKSPVLVI EVDGYAFHRE GTRQAERDAL KDAVLEKCGL PILRLSTIGS
DERNRIRKKL EDVVAS
|
|---|
| |