Gene Cpha266_0215 details

Gene Information

• Locus tag: Cpha266_0215
• ID: 4570702
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: +
• Start bp: 238734
• End bp: 239249
• Gene Length: 516 bp
• Protein Length: 171 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 639764815
• Product: rare lipoprotein A
• Protein accession: YP_910706
• Protein GI: 119356062
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0797] Lipoproteins
• TIGRFAM ID: [TIGR00413] rare lipoprotein A

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGAGATG AAAAACGAAA TTTCACCATC CCATTTTATG CCCTTTTGAT AGGGGCCTGG 
TACACCGCAC TCCAGATTAC TTTTCCGGCT TTCAGTAGCG CACAACCACC GGAATTCTCC 
ATTCAATCCA TAACTAATCA ACCATCAGCA AGTTCTTCCG GCATGTTGTC GGATCAACCG 
AAATCCAGGA CTTTCCTGCG TGTTGCCGAA GGCAAGGCAT CATATTATTC GAATCAGTTT 
CACGGGCGAA GGACTGCCAA TGGCGAAACC TTTGATATGA ATGAACTGAC GGCTGCTCAT 
CCTTCGCTGC CTTTTGGTAC CTGGGTCAGG GTTATCAATC TCAGAAACGG TAAAGATGTT 
GTTGTACGCA TCAACGATCG GGGCCCATTT GTCAGGGGTC GTATCATTGA CCTTTCCGCC 
GGTGCGGCAA AGCGAATCGG GCTTTTTAAG TCCGGTACAG CCAATGTGAG GATCGAGCCT 
GTAAAGCATA GTCCCGAAGA CCCGATGGCA GGTTGA 

 

Protein sequence

MRDEKRNFTI PFYALLIGAW YTALQITFPA FSSAQPPEFS IQSITNQPSA SSSGMLSDQP 
KSRTFLRVAE GKASYYSNQF HGRRTANGET FDMNELTAAH PSLPFGTWVR VINLRNGKDV 
VVRINDRGPF VRGRIIDLSA GAAKRIGLFK SGTANVRIEP VKHSPEDPMA G