| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3458 |
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| Symbol | |
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| ID | 4572067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3816485 |
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| End bp | 3818773 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639757517 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_903108 |
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| Protein GI | 118581858 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTTTG TCAAACACTT AAACCAGCCC CAGAAAAGCG CGGTGCTGCA TGGAGAAGGA
CCGCTGCTGA TCCTGGCCGG CGCCGGCTCG GGCAAGACCC GCGTCATCAC CCACCGTATC
GCGCACCTGA TCCACAATCA TGGGGTGCGT CCCTGGAATA TCCTGGCGGT GACCTTCACC
AACAAGGCAG CCAGGGAGAT GTCCGAACGG GTCAGCAGGC TGCTGGGGGG AGGCGATGCG
CCGCTGATCG CCACATTCCA TGCCGCCTGC GGCCGGATCC TGCGCCGCGA GATCCACCAC
CTGGGCTTCG ACTCCAGCTT TGCCATCTAC GACGAGCGTG ATTGCGAACG GCTACTGAAG
GATCTGCTGA AGGATATGGA CCTGGACGAT AAGAAGTTTT CGCCCAGGAT CGTTGCAGCC
CGTATCGATG ACTACAAGAA CCGCGGCCTG TTTCCCCATG ACCTGGATCC CGTGGCAACC
GGTGACATCT TCAACGCCAA GGTTGTCCAG ATCTATGCTG CCTACCAGGA ACGGCTGAGA
AAATGCAACG CACTTGATTT CGGCGACATG CTGATCCAGA CCGTGCGCCT GCTGGAACAG
TTTCCCGAGG TGCGTCAACG CTGCCAGGAA CGTTTCCAGT GGATCATGGT GGACGAATAC
CAGGACACCA ACCCGGTTCA GTACCGGCTG ATCCGGCTTC TGGCCGGAGA ACGTAGGAAT
CTTTGCGTGG TGGGTGACGA CGACCAGTCG ATCTACTCCT GGCGCGGGGC GGATATTCGC
AACATACTGG AATTCGAGAA GGACTTCCCG GACGTGGCGG TCGTGCGGCT GGAGCAGAAC
TACCGCTCCA CCACCACCAT CCTCAAGGCG GCCGGCGCGG TGGTCAGCCG AAATATCGGC
CGTCGGGGCA AGACCCTCTG GACCGAGAAT CCGGAGGGAG AGAAGATCCG CTACCACCGG
GTAGAATCGG ACCGGGAGGA GGCGCGCCTC GTGGCCCGAG AAATCGTCAG CCTGCGCTCA
CGCGGTATCC CGCTGGAGGA GATGGCGGTC TTCTACCGCA CCAATGCCCA GTCCCGCCTG
GTGGAGGAGG CGCTGGTTTC CGAAGCGCTT CCCTACCATA TCGTGGGGGG CGTACGTTTC
TATGCCCGCA TGGAGGTCAA GGACATCCTG GCCTATCTGC GGATACTGGA CAACCCGGCC
GACGAGATTT CGCTGAAACG GATCATCAAC GTGCCGAGCC GGGGCATTGG CGGGGCAACC
ATCGACCGCA TCTCCCAGCG GGTAGCCTCA AGCGGCGCCA GCTTTTACGC TGCCATGGCC
GAGTGTGCCG GGAGCGGGCT GCTGGGTTCC GGGCCGCGTG CCAGGGTCGC GTCGTTTGTC
GACATGATGG AACGTTTCAG GGAGATGGTT GCCCTGCGCG GTTTGCCTGA ACTGTGTCAG
ACTGTCATGG AGGAGAGCGG CTATCTGGCT CGCCTGCGGG AGAGTCGCGA CCAGGAGGAC
AGCGAGCGAC TTGAGAACCT GGAACAGCTG CTGGCGGCAA TGGAGGAGTT CTGTGAGAAG
GAGCCCCAGG CCGGCCTGTC GGCGTTCCTG GAGCAGGTCT CGCTGGTTTC GGACCTGGAG
CAGGGGGGGC AGGGCAAGCC ATCGGTGACC CTGATGACCC TGCATGCCGC CAAGGGTCTT
GAGTTCAGGG CGGTTTTCAT GATCGGTATG GAGGAGCGCC TCTTTCCCCA TGTGCGTGCC
CTGGATGACC TGGACGGAAT GGAAGAGGAG CGTCGCCTCT GTTACGTCGG CATGACCCGC
GCTCGCGAGC GACTCTACCT GCTCAATACC CGCCGAAGGT ACCTGTTCGG ACAGGAACAG
TGCAATCCGC CGTCACGCTT CCTGAAGGAT ATTCCGGCCG GATTGCTGGA TGACGGGGGA
GAACCGAGCC AGCCCGGTCT TGGGTTCCGC TCGGCGGCGG AACAGGCCGG CAGAAATGGG
CAAGAGCCCT CTACGGGCAT TATCGCCATG GGCCACTCCG GTCGTCGGGA GAAGACTGTT
GCCCGGCATG ACGGCGGACA CAATCTGGCA CAGGTCGTTT CAGCATGCGA TGAAATCGAA
GTCATTCCCG AGCCGCCCGA AGAGCACGAC GGCGTCTTTA TCGGCATGAA GGTCCGGCAT
GGCACGTTCG GGCAGGGTAC GATCCGCAAA CTCGAGGGAA GCGGCGAAAG CCAGAAGGTC
ATTGTCTGGT TCAATTCGGT TGGCCCCAAG AAGCTCATGC TGCGCTTCGC GGGCCTGGAG
CGGGCCTGA
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| Protein sequence | MDFVKHLNQP QKSAVLHGEG PLLILAGAGS GKTRVITHRI AHLIHNHGVR PWNILAVTFT
NKAAREMSER VSRLLGGGDA PLIATFHAAC GRILRREIHH LGFDSSFAIY DERDCERLLK
DLLKDMDLDD KKFSPRIVAA RIDDYKNRGL FPHDLDPVAT GDIFNAKVVQ IYAAYQERLR
KCNALDFGDM LIQTVRLLEQ FPEVRQRCQE RFQWIMVDEY QDTNPVQYRL IRLLAGERRN
LCVVGDDDQS IYSWRGADIR NILEFEKDFP DVAVVRLEQN YRSTTTILKA AGAVVSRNIG
RRGKTLWTEN PEGEKIRYHR VESDREEARL VAREIVSLRS RGIPLEEMAV FYRTNAQSRL
VEEALVSEAL PYHIVGGVRF YARMEVKDIL AYLRILDNPA DEISLKRIIN VPSRGIGGAT
IDRISQRVAS SGASFYAAMA ECAGSGLLGS GPRARVASFV DMMERFREMV ALRGLPELCQ
TVMEESGYLA RLRESRDQED SERLENLEQL LAAMEEFCEK EPQAGLSAFL EQVSLVSDLE
QGGQGKPSVT LMTLHAAKGL EFRAVFMIGM EERLFPHVRA LDDLDGMEEE RRLCYVGMTR
ARERLYLLNT RRRYLFGQEQ CNPPSRFLKD IPAGLLDDGG EPSQPGLGFR SAAEQAGRNG
QEPSTGIIAM GHSGRREKTV ARHDGGHNLA QVVSACDEIE VIPEPPEEHD GVFIGMKVRH
GTFGQGTIRK LEGSGESQKV IVWFNSVGPK KLMLRFAGLE RA
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