| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3397 |
|---|
| Symbol | |
|---|
| ID | 4572322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3748458 |
|---|
| End bp | 3749177 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 639757456 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_903047 |
|---|
| Protein GI | 118581797 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGGTA CATCGTCCGT GAGACTTAAG AAAGTGCTAA AGATGGCTCT AATTAACAAG
TTAACCGCTT CCCAGTTAAT TAGGCCGGTT CTAAGGCTAC ACTCCTACTG CTACAGGTTA
TCAAGCGAAC TGGCAATAAT CATTAGTAAA GAGGGGCTTC ATCCAAAGCA TAGTATTTTG
GAATATGAGT CATGGTTTTA TAATCATGTA GAGACAAGCT GGACTGTATT AGATGTTGGA
AGCAATACAG GTATTATGGC TCATTTGTTA GCTGGTAAAG TTGCCAAAGT TTATGGTATC
GAACTGCAGC AGTCTCTGGT TGAAGAAGCA AAAAAAACGT TTCAGTTACC TAATATAGAA
TATTTCTGTG CAGATGCTAC GTGTTTTTTT TATCAAGAGC TTCAGCCAAT TGACTGTGTT
GTACTATCTA ATGTTTTAGA GCACATCAAA AACAGAAGCT ATTTTTTGCA TAAACTTCTA
ACAGAATTGC CTTGGCGCAA ACCATATGAG AAGCGCTTTT TGATACGTGT ACCCCTCATA
ACTAGAGAAT GGATTGTTAT GTATAAGAAA AGACTTGGTC TTGAGTATCG CCTTGATGAC
ACTCATTACA TTGAATATAC ACAGGAGCAA TTTGCGCAAG AACTTGGTGA ATGTAATATT
CGCGTTGTCA ATCTTGATAT TCGCTATGGT GAAATATATG CAATTTGTAT GTCCGATTAG
|
|---|
| Protein sequence | MEGTSSVRLK KVLKMALINK LTASQLIRPV LRLHSYCYRL SSELAIIISK EGLHPKHSIL
EYESWFYNHV ETSWTVLDVG SNTGIMAHLL AGKVAKVYGI ELQQSLVEEA KKTFQLPNIE
YFCADATCFF YQELQPIDCV VLSNVLEHIK NRSYFLHKLL TELPWRKPYE KRFLIRVPLI
TREWIVMYKK RLGLEYRLDD THYIEYTQEQ FAQELGECNI RVVNLDIRYG EIYAICMSD
|
|---|
| |