| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3363 |
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| Symbol | |
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| ID | 4571570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3711253 |
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| End bp | 3712728 |
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| Gene Length | 1476 bp |
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| Protein Length | 491 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639757422 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_903013 |
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| Protein GI | 118581763 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA TCAAATCGTT ATCCGCGCCC GATCGAGAGT TTTTCAGGAA CGTTTCCCAG
GCAGCCTTCA CCAACCCCTT CAGCCAGTCA CGCATCGAAG TTGACCGCAG GATCGCCGAC
GCCCCGCCCT CCATGTCGTG GGACGATACC GTTGAACAGG CTGTCGCACG GGTCAGCGAG
CGGCTGCGGA TGCTGAAGCT GCGTGGCTCA ACCGACCTGA GCGGCTACAG CCAGAGCGAC
CGGGAACTGT TGCGCACCGC GATGCTCTTC GACCTGTACC ACCAGTACCG GCAACCCTTT
GACGCCTTTA TCCTGAAACA GCTTACGGCA GGGGACACCC CCATCCCGGT CCCCTTCGCG
TCAACAATCC TTTCCGCCCT TGCCAACATC GGCTTGAACA GTGCTGCCGC GCAACGCTTT
CTGGCCATCT TCTACCAGAT CCGGAGAGCC TTCTACTTTA TCGAAAGCGG GCTGACCGGC
CCCTCCCCGG CCATGCAGAA CCTGCGCCTG CAACTCTGGA ACAATATCTT CACCTGCAAC
ATCACCTGGT ACGAAGAGTA TCTCTGGGAC CGGATGGAAG ATTTCTCGAC CCTGCTGCTG
GGCGAAACCG GCACCGGCAA GGGGGCCGCG GCTGCAGCCA TCGGACGCTC CGGCTTCATC
CCCTTCAATG AACGCAAGGG GTGCTTCAGC GAGAGCTTTA CCCGCTCCTT TATTGCCATC
AACCTGTCAC AGTATCCTGA ATCCCTGCTG GAGTCGGAAC TCTTCGGTCA CAAAAAAGGC
GCCTTTACCG GCGCCATCGA ACATCACGAG GGGGTCTTCG ACCGCTGTTC TCCCCACGGC
TCCATTTTTC TGGATGAAAT CGGCGATGTA TCCATCCCGG TGCAGATCAA GCTCCTGCAG
GTATTGCAGG AACGAACATT CGCACCGGTG GGAAGTCACG AACGACGACG CTTCCAAGGG
CGGGTGATCG CGGCAACCAA CCGACCGCTG GACGAGATGC GTGCCAAGGG GCAGTTCCGC
AACGATTTCT ACTACCGCCT CTGTTCCGAC ATCGTAACGG TTCCCTCGCT CAGGGAGAGG
ATCAGGAAGG AATCCCGCGA ACTGGAAGTG CTGATCAGCA GGATTCTGGT CCGCATGGTC
GGTGAAAAAG CCAGGGAATA CACCTGTCTG GTATACGACA TCATCAGGCG GGATGTGGGA
AGTGACTATG CCTGGCCGGG CAACGTGCGG GAGCTGGAAC AGGCGGTGCG TAGAATCATC
ATTACCCGCC ATTACAGGGG TGACAGAACC CCGCCGAATC AGGAGAATGA CGACAACAAT
CTTCTTGATG CCATCAGGAG CGAATCACTG GACGCCGAAT CGCTGTTGGC AGGCTACTGT
AGCGTGCTCT ACCAACGTCA CGGCACCTAC GAAGAGGTGG CGCGAATCAC GAACCTTGAC
CGCCGAACGG TCAAGAAATA TATCCGGAAG GACTAA
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| Protein sequence | MNEIKSLSAP DREFFRNVSQ AAFTNPFSQS RIEVDRRIAD APPSMSWDDT VEQAVARVSE
RLRMLKLRGS TDLSGYSQSD RELLRTAMLF DLYHQYRQPF DAFILKQLTA GDTPIPVPFA
STILSALANI GLNSAAAQRF LAIFYQIRRA FYFIESGLTG PSPAMQNLRL QLWNNIFTCN
ITWYEEYLWD RMEDFSTLLL GETGTGKGAA AAAIGRSGFI PFNERKGCFS ESFTRSFIAI
NLSQYPESLL ESELFGHKKG AFTGAIEHHE GVFDRCSPHG SIFLDEIGDV SIPVQIKLLQ
VLQERTFAPV GSHERRRFQG RVIAATNRPL DEMRAKGQFR NDFYYRLCSD IVTVPSLRER
IRKESRELEV LISRILVRMV GEKAREYTCL VYDIIRRDVG SDYAWPGNVR ELEQAVRRII
ITRHYRGDRT PPNQENDDNN LLDAIRSESL DAESLLAGYC SVLYQRHGTY EEVARITNLD
RRTVKKYIRK D
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