Gene Ppro_3010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3010 
Symbol 
ID4574300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3286260 
End bp3287726 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content61% 
IMG OID639757064 
Productsignal transduction histidine kinase 
Protein accessionYP_902665 
Protein GI118581415 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0663481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGA AGAAACTGCT CAGCGTCCTG ATCGCCGAAG ACAACGAGGA TGACGCCATA 
CTCGTGGCGC GCAGCCTGCG TCGCTCGGGC TATGAGCTGA TCTACGAGCG TGTCGATACG
CCGCAGGGGA TGGGGGAGGC GCTTGACCGA AAGCCTTGGG ATATCATCCT CGTGGACTAC
CGCATGCCCG GCTTTGGCGG GCTGGATGCC CTGAATATCG TCCGGGAGAG AAACCTGGAC
ATTCCGGTCA TCCTCGTCTC CGGGGTCATT CTCGAAGACG TGGCCATCGA AGCCATGCGC
CAAGGGGCCT GCGACTGTAT CAAGAAAGAT CATCTCGACC GCCTCTCTCC GGCCGTTGAA
CGGGAACTGG CGGCGGCGGC GGAGCGGCGG GAGCGGCGCC AGGCCGAGCA GGCCCTGCGG
GAGAGCGAGG AACAGTTCCG GGTCCTGGCC GAGACGTCTC CGGCGGCGAT CGTCCTTTTC
CAAGGGGAAA ACATCGTCTA TGTCAACCCA TCGGCCGAGC GGCTGACCGG ATACACGGAA
GAAGAGCTCC TGGGCATGAG GTACGGGGAG TGGATACATG ACGATTTCAA GAACCTGGTG
AGGGAATGGG TGCTGGTGCG GCAGCAGGAA CCGCTGGCGC TCGCGGAGTA TGAGTTGCGC
TATGTGACCA AGGGGGGCGA GGAGCGTTGG GCGCTGTTCT CCGCCGGCCG CATCGACTAC
AAGGGGAAGC CTGCCGGCAT AGCCACCATC TTCGACATAA CTGGCCGCAA GCGGGCCGAG
GAGCAGTTGC GGGATTCGCT CCGCGAGAAG GAGATCCTGC TCCACGAGAT CCATCACCGG
GTGAAGAACA ACCTGCAGAT CGTCTCCACC CTGCTCGATC TGCAATCCGA CTACATCGAT
GACGAACAGT CACTGAGGTA CTTCCAGGAA AGCCAGGACC GGATCAACTC CATGGCCCTG
GTTCATGAGG CGCTGTATCG TTCCAGGGAT CTGGCCCGGA TCGACTTCAC CGTGTACCTG
GAGGGGCTTA CTGACCACCT GTTCAAGTCC TATGTCGTCG ATCCGAAGCG GATTTCCCTG
AAATGCGCTA TCGCCAAGGT CACGCTGGGC ATCGACGAGG CGATCCCCTG CGGTCTGATC
GTCAACGAGC TGGTCTCCAA CTCCCTGAAA CATGCTTTTC CCCAAGGGAG ACACGGCGAG
ATCCTGGTTC AGTGCCAGAG CGCCGAAGAT GGCCTGATCC GTCTCCGTGT CTCGGATAAC
GGCGTAGGCC TCCCCCCTGA CCTGGATTTC ATGGCGACCA AGACCCTGGG GCTGCAGTTG
GTGACCATGC TGGTCAGGCA GGTGCGGGGA GAACTGACGG TCCAGGGGGA GGTCGCTGGT
GGGACGGCAT TCACCATCAG TTTCCGGGGG ATGCAGCAGG GGGGAGGGGT GGTTCAGGTC
GCGGATGACG CGAAGCGGAC ATCCTGA
 
Protein sequence
MEKKKLLSVL IAEDNEDDAI LVARSLRRSG YELIYERVDT PQGMGEALDR KPWDIILVDY 
RMPGFGGLDA LNIVRERNLD IPVILVSGVI LEDVAIEAMR QGACDCIKKD HLDRLSPAVE
RELAAAAERR ERRQAEQALR ESEEQFRVLA ETSPAAIVLF QGENIVYVNP SAERLTGYTE
EELLGMRYGE WIHDDFKNLV REWVLVRQQE PLALAEYELR YVTKGGEERW ALFSAGRIDY
KGKPAGIATI FDITGRKRAE EQLRDSLREK EILLHEIHHR VKNNLQIVST LLDLQSDYID
DEQSLRYFQE SQDRINSMAL VHEALYRSRD LARIDFTVYL EGLTDHLFKS YVVDPKRISL
KCAIAKVTLG IDEAIPCGLI VNELVSNSLK HAFPQGRHGE ILVQCQSAED GLIRLRVSDN
GVGLPPDLDF MATKTLGLQL VTMLVRQVRG ELTVQGEVAG GTAFTISFRG MQQGGGVVQV
ADDAKRTS