Gene Ppro_3009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3009 
Symbol 
ID4574299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3283897 
End bp3286248 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content62% 
IMG OID639757063 
Producthypothetical protein 
Protein accessionYP_902664 
Protein GI118581414 
COG category[T] Signal transduction mechanisms 
COG ID[COG3920] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAGC AGGAAAGCCA GAGCGTGATC GACCGTTTGA CCGAGGCGCT GCGGAAAGCC 
AGGGAGGGAG ACTGTACCCT GCTCCTGGAA GTTGCCGACG GGGGCGATGA CATCGATGCC
CTGAGCCGTG AGGTCAGGCT CCTCGTCGAG AGCATGCGGG GACATGCGGA CGCCCGGGCC
GTTGCCGAAG CCGAGCTCAG GGAGTGTCGG GAATCCTGCC GCCGCCTGAA GGCCAATATT
CCCGGCATGG TATACCTGTT CGCGCTGCAC CCGGACGGGA CGTTTTCCTT TCCCTCGGTG
AGCGATGCCT CTGGGGAGCT GTTCGCCATC GCTCCGCACG AACTCATGGC CGATGTCGGA
CTCCTCACCA GGCTGATCCA CCCCGATGAT CGCGACAGGT TCTTCGCATC CGTCAGGCGT
TCCGCCGAGA CGCTCGCTCC CTGGCGGGAG GAGATCCGGC ACATCGTGCA TGGCGAAGTA
CGCTGGTACG ACTGCATTTC CCGCCCCGAG CGGCATGCCA ACGGAGATAT CGTCTGGGAC
GGCATCATCC TGGAAATAAC CGGCCGCAAG CGCGCGGAAG AGAGGCTGAG CGAACAGCTC
CACTTCCTCC AGCAGTTGCT GGATACCATC CCGCTGCCGG TGTTTTACAA GGATACGGAT
GGGGTGTACC TGGGGTGCAA CTCTGCCTTC GAGCTGTTCT GCGGCTTTTC CAGGGAGCGT
ATCGTCGGCA GGACGGTCCA TGACCTGGCG CCGAGCCAGC GGGCAGATGT CTACCAGGAG
GCCGACGCCG CCCTGTTTGA TGCGCCCGGG GTGCAGGTCT ATGAGGCGGA GTTCCAGAAC
AGGGACGGCT CCACGCGCGA TGTTATCTTC AACAAGGCCA CCTTTGTGGA TCCGGAGAAC
CGGGTGGCCG GTCTGGTCGG CGCGATCACG GACATAAGCG GGCGCAGACG GGCCGAGCGC
GAGCTGTTGC TCAAAAATGA CATGCTGCGT GCCATCATTC AGGCCGCCCC CACGGCGATC
ATCGGTCTGG ACCTGGACGG AAATGTGTGC AACGTCTGGA ATCCGGCGGC GGAACGGATG
CTGGGGTGGA GCGCCGCAGA GGTCATGGGA AAACCGCTCC CCGGTATGGA TCCGGAGCAG
CGGGAAGAGT TCAGGGACTT CCAGGAGTGG ATTCGCGGTG GCAGAATACT GGACGGCGTC
GAGGTCAGGC GCCACCGCCA GGACGGCTCT CCCATGGATT GCAGCATCTA CGCCTCGCCG
CTGCATGACA CCGAGGGGCG CATCGTTGGC AGCATCGCCG TGCTGGTTGA TATTACCGAG
CGCAAGCAGG TGGAAGAGTC GCTGCGCCTG GCAAACCTGA TCGTGGAGAA CAGCCCGCTG
GTGCTGTTCC GCTGGCGGGC GACCGAGGGG TGGCCGGTGG AGCTGGTTTC CCGTAATGTG
ACCCGTTTCG GCTATACGCC GGACGAGCTG ATTACCGGTG TGGTCCCTTT CTCCGCCCTG
GTGCATCCCG ATGACCTGCG GCAGGTCGCC GCCGAGGTGG CCGAGTTTGT CCGTCAGGGG
GTTGATCGCT TTCAGCAGGA GTACCGCATT GTCACCAAAG GGGGTGCTGT TCGCTGGATC
GACGACCGGT CGGCCGTGGA ACGTGACAGC CAGGGGCGCA TCAGCCACTT CCAGGGAGTG
GTGCTGGATA TCACCGAGCG CAAGCTGGCT GAGGAGAAAA TCCGGGCCGC GCTGACGGAA
AAGGTGGTCC TTTTGAAGGA GATCCACCAC CGGGTCAAGA ACAACCTGCA GATAATCTCC
ACCCTGCTGG ACCTGCAGGC CGAATCCGTG CGGGATGAGG GGGCGCTATG CGCCTTCCGG
GAGAGCCAAG ACCGTATCAG GGCCATGGCG CTGGTGCACG AGAAGCTCTA CCGGACCGAG
GACCTCTCCT TCATTGATTT TTCGGGGTAC ATCGAGAGCC TGACCGCCCA TCTCTACAAC
AGTTATGCCA TCGATTTCGG GCGCGTCTCC TTCTCCATTG ACGCGGGTAA CGTCTGCCTG
AGTATCGATC AGGCCATTCC CTGCGGGTTG ATCATCAGCG AACTGGTCTC CAATTCCCTG
AAGTACGCTT TTCCCGGAAG CGCGGCGGGG AATATCAGCG TCAGCATTCG CGAACAAGGG
GACGGCATGG TCTCGTTGAC GGTTGCCGAC AGCGGTGTCG GCCTGCCCGT CAACCTGGAT
TTCACCGCCA GCGAGACCCT GGGGCTGCAA CTGGTCAGGA TGCTGGTCAA ACAGCTCAGG
GGAGAGATTG CTCTGGACAG TTCCGGTGGT GCCCGGTTTA GCATCCGCTT TCCGATGAGT
CCCGCTGGAT GA
 
Protein sequence
MTEQESQSVI DRLTEALRKA REGDCTLLLE VADGGDDIDA LSREVRLLVE SMRGHADARA 
VAEAELRECR ESCRRLKANI PGMVYLFALH PDGTFSFPSV SDASGELFAI APHELMADVG
LLTRLIHPDD RDRFFASVRR SAETLAPWRE EIRHIVHGEV RWYDCISRPE RHANGDIVWD
GIILEITGRK RAEERLSEQL HFLQQLLDTI PLPVFYKDTD GVYLGCNSAF ELFCGFSRER
IVGRTVHDLA PSQRADVYQE ADAALFDAPG VQVYEAEFQN RDGSTRDVIF NKATFVDPEN
RVAGLVGAIT DISGRRRAER ELLLKNDMLR AIIQAAPTAI IGLDLDGNVC NVWNPAAERM
LGWSAAEVMG KPLPGMDPEQ REEFRDFQEW IRGGRILDGV EVRRHRQDGS PMDCSIYASP
LHDTEGRIVG SIAVLVDITE RKQVEESLRL ANLIVENSPL VLFRWRATEG WPVELVSRNV
TRFGYTPDEL ITGVVPFSAL VHPDDLRQVA AEVAEFVRQG VDRFQQEYRI VTKGGAVRWI
DDRSAVERDS QGRISHFQGV VLDITERKLA EEKIRAALTE KVVLLKEIHH RVKNNLQIIS
TLLDLQAESV RDEGALCAFR ESQDRIRAMA LVHEKLYRTE DLSFIDFSGY IESLTAHLYN
SYAIDFGRVS FSIDAGNVCL SIDQAIPCGL IISELVSNSL KYAFPGSAAG NISVSIREQG
DGMVSLTVAD SGVGLPVNLD FTASETLGLQ LVRMLVKQLR GEIALDSSGG ARFSIRFPMS
PAG