Gene Ppro_2884 details

Gene Information

• Locus tag: Ppro_2884
• ID: 4573937
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 3155177
• End bp: 3157048
• Gene Length: 1872 bp
• Protein Length: 623 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 639756936
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_902539
• Protein GI: 118581289
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.402765
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCAAT CCTTCTGGAG ACCGCTGTTC GCCATACTCC TGTTCATGCT GGTCTTTCAT 
CTCACCAACA TCTTCTTTGC GCAACAGGGC GCCCAGGTGG CCCAGATCAG CTACAGCCGC 
CTGCGCGCTG AACTGGCTCA AGACAACATC AAAAAGATAA CCCTCAAGGG GACGGCTGTT 
ACGGGCGAGT TTCGGGGCAA GACCAGGGTA AGCGCCCTGG TCCAGGGCAA GGAGCAGCAG 
CGCGAGTTCA CCGGCTTCAG CAGTGTCCTG CCGACCATCG ACGACCAGAC CCTGGTGCCG 
GAACTGATGG CGCGCAAGGT GGAGGTGAGC GCCCTGTCCA CGGAGACCCC TCTGCTGCTC 
AATGCCCTGA TCTACGTGGC GCCCTGGGTG ATCCTGATCG CCATCTGGTG GGTGGGGATG 
CGCTCCATGC GCAGCCAGGG GCCGAGCGGG ATGATGGGCG GCTTTTCCCG CTCCGGGGCA 
AAGGCGTATC TGGCAGGTGA CAAGATGGCC GTGTCTTTCA AGGATGTGGC CGGCATGGAG 
GACAGCAAGC AGGAGCTGAA GGAGGTCGTG GACTATTTGC GCAATCCCAA GCAGTTCGCC 
CGCATCGGCG GCAAGGTTCC CAAGGGGGTT CTGCTGGTGG GACCTCCGGG GACCGGCAAG 
ACGCTCCTGG CCCGGGCGGT GGCCGGTGAG GCGGGAGTGG CCTTTTTCAG CATCTCCGCT 
TCCCAATTCA TCGAGATGTT TGTGGGGGTC GGCGCCAGCC GGGTGCGCGA TCTGTTTACC 
AATGCCAAGA AGGCCGCTCC CAGCATCGTC TTCATCGACG AACTGGATGC CGTCGGTCGC 
AGTCGAGGCG CCGGTTTCGG TGGTGGCCAT GACGAGCGGG AGCAGACCCT GAACCAGCTC 
CTGTCGGAGA TGGACGGTTT CGACCAGCAC GAGGAGGTCA TCGTGCTGGC CGCCACCAAC 
CGCCCCGATG TACTTGACCC GGCCCTGCTG CGCCCCGGCC GCTTCGACCG GCACGTAGTG 
ATCGAGCGGC CGGACTGGCG CGATCGGGAG AAGATCCTCC AAGTCCACGT GCGCAAGATC 
ACCATGAACG GCAGGATCGA CCTGGGGGTG ATTGCCCGCG GCACCCCCGG CATGACCGGC 
GCCGACCTTG AAAGCCTGGT CAACGAGGCA GCCATCCTGG CCTCGCGCGA GAACGCGGCC 
GCGGTCACCA TGGAGCATCT GGAAAAGGCC AAGGACAAGA TCCTGATGGG AAGCGAGCGC 
AGGATGATCA TCTCTTTGGA AGAGAAGCGC ATCACCGCCT ACCACGAGGC CGGCCATACC 
CTGGTGGCCA GACTGCTCCC CGGCACCGAC CCGATCCACA AGGTGACCAT CATCCCCCAC 
GGCATGGCCC TGGGGGTGAC CCAGCAACTC CCCGAGGACG ACCGTTACCA CTATCCCCAG 
AGCTATCTGG AAAATCGGCT GGTGGTAGCC ATGGGGGGGC GAGTGGCGGA GCGGCTTGCG 
TTTGGCGAGG TCTCCAGTGG TGCCCAGGGG GATTTGAAAC AGGTTACTTC CCTGGCGGAG 
AAGATGGTCT GTCAATGGGG GATGAGTGAA AAGGTGGGCG GGATGACCTT CAGCCGGGGA 
GAGGAACACC CCTTCCTGGG GATGAAGCTG GCCGAGGAGA AGACCTTTTC CGAGGCCATG 
GCCTGGCGCA TCGACCAGGA GATAGCGGCC TTCATCACCA GAGCGGAGCA GCGCGCCGGT 
GACCTTCTGT CCGCCAATCG CGAGCGACTG GACCTTTTGG CCCAGGCCCT GCAGGACGAG 
GAAACCCTGG ACGGTAGCCG GGTTGACGAG ATCATCGGTT CGCTCAACAC GGCTCAGGCG 
CCTCCCCCCT GA 

 

Protein sequence

MNQSFWRPLF AILLFMLVFH LTNIFFAQQG AQVAQISYSR LRAELAQDNI KKITLKGTAV 
TGEFRGKTRV SALVQGKEQQ REFTGFSSVL PTIDDQTLVP ELMARKVEVS ALSTETPLLL 
NALIYVAPWV ILIAIWWVGM RSMRSQGPSG MMGGFSRSGA KAYLAGDKMA VSFKDVAGME 
DSKQELKEVV DYLRNPKQFA RIGGKVPKGV LLVGPPGTGK TLLARAVAGE AGVAFFSISA 
SQFIEMFVGV GASRVRDLFT NAKKAAPSIV FIDELDAVGR SRGAGFGGGH DEREQTLNQL 
LSEMDGFDQH EEVIVLAATN RPDVLDPALL RPGRFDRHVV IERPDWRDRE KILQVHVRKI 
TMNGRIDLGV IARGTPGMTG ADLESLVNEA AILASRENAA AVTMEHLEKA KDKILMGSER 
RMIISLEEKR ITAYHEAGHT LVARLLPGTD PIHKVTIIPH GMALGVTQQL PEDDRYHYPQ 
SYLENRLVVA MGGRVAERLA FGEVSSGAQG DLKQVTSLAE KMVCQWGMSE KVGGMTFSRG 
EEHPFLGMKL AEEKTFSEAM AWRIDQEIAA FITRAEQRAG DLLSANRERL DLLAQALQDE 
ETLDGSRVDE IIGSLNTAQA PPP