| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2709 |
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| Symbol | |
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| ID | 4573798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 2949817 |
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| End bp | 2952255 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639756765 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_902369 |
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| Protein GI | 118581119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.601691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAT ACCGACTCTC CGAACTGCTT GACATGGGCA TCATCCAGAA AATGGCCGAC
ACCCACTATC GGGCAACGGG CATCCCAATC GGCATCATCG ACGCCATCGA CGATGCTGTT
CTGGTAGGCT CCGGCTGGCA GGAGATCTGC GTCAGATTCC ACCGCGCAGC CCTGCTTTCA
CTGCAGCGTT GCCGGGAAAG CGACAACTAC ATCAAGAGCC ATCTCGTGGA AGGCCAGTCC
TGCCACTACA GATGCAAAAA CGGCCTTAAT GACATAGGTA TTCCGATTAT TGTTGCGGGG
CGACATCTGG CGACCATGTT TCTGGGACAA TTTTTCTATG AAGAAGAGGA ACCGGAGCGT
GAGTACTTCA TCCAACAGGC CGATGAGTAC GGTTTCGATC GTGACGAGTA TCTTGCCGCC
CTTGACCACG TGCCACGCTT CAGCCATGAA AAAGTCAACA ACATGCTGGA GTACGACAAG
GTGCTGACAG TCTTCATCGC CGACTTGGCG GAGCGTTCGC TCCAGAAAAT GCAGGCCGAG
GAGGAGACCC GGGCAAGTGA GCGTAAATTT CACACCATCC TTGACCAGGC CTATCAGTTC
ATCGCTCTCC TCTCCACGGA AGGCAGAATT CAGGAGGCAA ACAGGACCGT CCTGCAATTC
GGCGGCATCG AGGATAACTG CGCAACGGGA AAGCTGTTTT GGGAAACCAG CTGGTGGAGC
CACTCCCCTG AACTGCGGAA AAAAATCCGT GACTCCGTGC ATAAGGTTGT CCGGGGGGAG
TTTATCAGGT TCGAGGCGAC CCACCCTGCA ACCGATGGGA CCCTGCAGTA TGTGGATCTG
TCTCTCAAGC CGGTCAGGAA TCCGACCGGC GCTGTGGTCC TTCTGATTGC GGAAGCCAGG
GATATCAGCG AACAAAAGCG GGTGGAACAG GCTCTCGAGC TGAGCAACCT TGTGGTGGAA
AACAGCCAGG TGGTGCTCTT CCGCTGGAAA GCAGTCGAGG GATGGCCGGT CGTCATGGTT
TCCCGCAACG TGAGCCAGTT CGGCTATACT CCGGAAGAAT TCCTCTCCGG CACGCTCCAC
TATGCATCAA TCATCCACCC TGAAGATCTT GATCGAGTAA TCCGGGAAGT CCGGTATTTT
TCAACCCGCG GCGTCTCCCA CACCCACCAT GAATACCGGA TCATCGCCAA AGACGGCCGC
GTACACTGGG TTGTCGAACG TTCTTTGGTT GAGCGCAACA ACAAGGGGGA GATCGATTTT
TTCCAGGGAG TGGTGATAGA CACCACCGAG CGCAGACACA TGGAGGAGGA ACTGGTCAAG
GCCCAGAAAC TGGAATCCGT CGGCCTGCTT GCCGGCGGCA TCGCCCACGA CTTCAACAAC
ATCCTCACCG GCATCCTGGG CAACGCGTCT CTCGCGAAGA TGCTGTTCTC CCCCCAGGAC
AGGGCATATG CCTATGTGAG CAACATCGAA AGCGCCGCCT ACCGGGCCAA GGACCTGACT
CTGCAGTTCC TGACCTTCTC CAAGGGGGGC GCTCCCATCA AAAAACCGGT GAACAGCGTT
GAACTGATAC GCAACAACAC GCAGCTGGCC CTAAGCGGCC TCAAATCAAC CTGCGAGCTG
AGCGTTCCGG ATGACCTGCG GATCGTCGAG GTCGATGAGG GACAGATCAG CCAGGTGATC
AACAACCTGA TCATCAACGC GGACCAGGCC ATGCCGCGGG GTGGCGTCAT CCGGGTGGTC
TGCGAAAACG TGGAGACAAG CGCCAGCAAC GGGCTTCCCC TGAAAGAGGG CAGCTATGTC
AGGGTCAGCG TCAGCGACCA GGGGGCTGGA ATAACGGCGG AGCACAGGGG AAAGATCTTC
GACCCCTATT TCACCACAAA AGATAGGGGG CACGGCCTGG GCCTCGCCTC GGCCTACGCC
ATCATGAAGA AGCACGCCGG CCACATCTGC GTGGATTCAA AACCGGGCGC CGGCGCGACC
TTCACCATCT ATCTCCCTGC TTCCGACGCA GCGACGGCCA TTACAACGGA AGAGCCCGCC
ACGGCCGCCG CCGGCAGCGG CAGGATACTG GTCATGGATG ACGAGCCGCT TGTGAGAATG
GTAACGGGAG AGATGCTGGA ACATATGGGC TACGACGTGG AATTCGCCCA GAATGGCGAG
GAGGCCCTGG CCATGTACGG CGCGGCCCGC GAGTCAGGTG TCCCCTTTGA TGCGGTGATC
ATGGACCTGA CCGTCCCCGG CGGCATGGGG GGCAGGGAGG CGATCCAGAG AATCCGGGAG
ATTAATCCGA ACGTCAGGGC CATCGTTTCC AGCGGCTATT CTGACGACCC GGTCATGGCC
AATCACCTGA ACTACGGCTT CGCGGGGGTG GTGGTGAAAC CGTACGACCT GGGCGAGCTG
GGTGCCCAGT TGGAGAGGGT ATTGCGGAAA CAGGAGTGA
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| Protein sequence | MSEYRLSELL DMGIIQKMAD THYRATGIPI GIIDAIDDAV LVGSGWQEIC VRFHRAALLS
LQRCRESDNY IKSHLVEGQS CHYRCKNGLN DIGIPIIVAG RHLATMFLGQ FFYEEEEPER
EYFIQQADEY GFDRDEYLAA LDHVPRFSHE KVNNMLEYDK VLTVFIADLA ERSLQKMQAE
EETRASERKF HTILDQAYQF IALLSTEGRI QEANRTVLQF GGIEDNCATG KLFWETSWWS
HSPELRKKIR DSVHKVVRGE FIRFEATHPA TDGTLQYVDL SLKPVRNPTG AVVLLIAEAR
DISEQKRVEQ ALELSNLVVE NSQVVLFRWK AVEGWPVVMV SRNVSQFGYT PEEFLSGTLH
YASIIHPEDL DRVIREVRYF STRGVSHTHH EYRIIAKDGR VHWVVERSLV ERNNKGEIDF
FQGVVIDTTE RRHMEEELVK AQKLESVGLL AGGIAHDFNN ILTGILGNAS LAKMLFSPQD
RAYAYVSNIE SAAYRAKDLT LQFLTFSKGG APIKKPVNSV ELIRNNTQLA LSGLKSTCEL
SVPDDLRIVE VDEGQISQVI NNLIINADQA MPRGGVIRVV CENVETSASN GLPLKEGSYV
RVSVSDQGAG ITAEHRGKIF DPYFTTKDRG HGLGLASAYA IMKKHAGHIC VDSKPGAGAT
FTIYLPASDA ATAITTEEPA TAAAGSGRIL VMDDEPLVRM VTGEMLEHMG YDVEFAQNGE
EALAMYGAAR ESGVPFDAVI MDLTVPGGMG GREAIQRIRE INPNVRAIVS SGYSDDPVMA
NHLNYGFAGV VVKPYDLGEL GAQLERVLRK QE
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