Gene Ppro_2709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2709 
Symbol 
ID4573798 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2949817 
End bp2952255 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content58% 
IMG OID639756765 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_902369 
Protein GI118581119 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.601691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAT ACCGACTCTC CGAACTGCTT GACATGGGCA TCATCCAGAA AATGGCCGAC 
ACCCACTATC GGGCAACGGG CATCCCAATC GGCATCATCG ACGCCATCGA CGATGCTGTT
CTGGTAGGCT CCGGCTGGCA GGAGATCTGC GTCAGATTCC ACCGCGCAGC CCTGCTTTCA
CTGCAGCGTT GCCGGGAAAG CGACAACTAC ATCAAGAGCC ATCTCGTGGA AGGCCAGTCC
TGCCACTACA GATGCAAAAA CGGCCTTAAT GACATAGGTA TTCCGATTAT TGTTGCGGGG
CGACATCTGG CGACCATGTT TCTGGGACAA TTTTTCTATG AAGAAGAGGA ACCGGAGCGT
GAGTACTTCA TCCAACAGGC CGATGAGTAC GGTTTCGATC GTGACGAGTA TCTTGCCGCC
CTTGACCACG TGCCACGCTT CAGCCATGAA AAAGTCAACA ACATGCTGGA GTACGACAAG
GTGCTGACAG TCTTCATCGC CGACTTGGCG GAGCGTTCGC TCCAGAAAAT GCAGGCCGAG
GAGGAGACCC GGGCAAGTGA GCGTAAATTT CACACCATCC TTGACCAGGC CTATCAGTTC
ATCGCTCTCC TCTCCACGGA AGGCAGAATT CAGGAGGCAA ACAGGACCGT CCTGCAATTC
GGCGGCATCG AGGATAACTG CGCAACGGGA AAGCTGTTTT GGGAAACCAG CTGGTGGAGC
CACTCCCCTG AACTGCGGAA AAAAATCCGT GACTCCGTGC ATAAGGTTGT CCGGGGGGAG
TTTATCAGGT TCGAGGCGAC CCACCCTGCA ACCGATGGGA CCCTGCAGTA TGTGGATCTG
TCTCTCAAGC CGGTCAGGAA TCCGACCGGC GCTGTGGTCC TTCTGATTGC GGAAGCCAGG
GATATCAGCG AACAAAAGCG GGTGGAACAG GCTCTCGAGC TGAGCAACCT TGTGGTGGAA
AACAGCCAGG TGGTGCTCTT CCGCTGGAAA GCAGTCGAGG GATGGCCGGT CGTCATGGTT
TCCCGCAACG TGAGCCAGTT CGGCTATACT CCGGAAGAAT TCCTCTCCGG CACGCTCCAC
TATGCATCAA TCATCCACCC TGAAGATCTT GATCGAGTAA TCCGGGAAGT CCGGTATTTT
TCAACCCGCG GCGTCTCCCA CACCCACCAT GAATACCGGA TCATCGCCAA AGACGGCCGC
GTACACTGGG TTGTCGAACG TTCTTTGGTT GAGCGCAACA ACAAGGGGGA GATCGATTTT
TTCCAGGGAG TGGTGATAGA CACCACCGAG CGCAGACACA TGGAGGAGGA ACTGGTCAAG
GCCCAGAAAC TGGAATCCGT CGGCCTGCTT GCCGGCGGCA TCGCCCACGA CTTCAACAAC
ATCCTCACCG GCATCCTGGG CAACGCGTCT CTCGCGAAGA TGCTGTTCTC CCCCCAGGAC
AGGGCATATG CCTATGTGAG CAACATCGAA AGCGCCGCCT ACCGGGCCAA GGACCTGACT
CTGCAGTTCC TGACCTTCTC CAAGGGGGGC GCTCCCATCA AAAAACCGGT GAACAGCGTT
GAACTGATAC GCAACAACAC GCAGCTGGCC CTAAGCGGCC TCAAATCAAC CTGCGAGCTG
AGCGTTCCGG ATGACCTGCG GATCGTCGAG GTCGATGAGG GACAGATCAG CCAGGTGATC
AACAACCTGA TCATCAACGC GGACCAGGCC ATGCCGCGGG GTGGCGTCAT CCGGGTGGTC
TGCGAAAACG TGGAGACAAG CGCCAGCAAC GGGCTTCCCC TGAAAGAGGG CAGCTATGTC
AGGGTCAGCG TCAGCGACCA GGGGGCTGGA ATAACGGCGG AGCACAGGGG AAAGATCTTC
GACCCCTATT TCACCACAAA AGATAGGGGG CACGGCCTGG GCCTCGCCTC GGCCTACGCC
ATCATGAAGA AGCACGCCGG CCACATCTGC GTGGATTCAA AACCGGGCGC CGGCGCGACC
TTCACCATCT ATCTCCCTGC TTCCGACGCA GCGACGGCCA TTACAACGGA AGAGCCCGCC
ACGGCCGCCG CCGGCAGCGG CAGGATACTG GTCATGGATG ACGAGCCGCT TGTGAGAATG
GTAACGGGAG AGATGCTGGA ACATATGGGC TACGACGTGG AATTCGCCCA GAATGGCGAG
GAGGCCCTGG CCATGTACGG CGCGGCCCGC GAGTCAGGTG TCCCCTTTGA TGCGGTGATC
ATGGACCTGA CCGTCCCCGG CGGCATGGGG GGCAGGGAGG CGATCCAGAG AATCCGGGAG
ATTAATCCGA ACGTCAGGGC CATCGTTTCC AGCGGCTATT CTGACGACCC GGTCATGGCC
AATCACCTGA ACTACGGCTT CGCGGGGGTG GTGGTGAAAC CGTACGACCT GGGCGAGCTG
GGTGCCCAGT TGGAGAGGGT ATTGCGGAAA CAGGAGTGA
 
Protein sequence
MSEYRLSELL DMGIIQKMAD THYRATGIPI GIIDAIDDAV LVGSGWQEIC VRFHRAALLS 
LQRCRESDNY IKSHLVEGQS CHYRCKNGLN DIGIPIIVAG RHLATMFLGQ FFYEEEEPER
EYFIQQADEY GFDRDEYLAA LDHVPRFSHE KVNNMLEYDK VLTVFIADLA ERSLQKMQAE
EETRASERKF HTILDQAYQF IALLSTEGRI QEANRTVLQF GGIEDNCATG KLFWETSWWS
HSPELRKKIR DSVHKVVRGE FIRFEATHPA TDGTLQYVDL SLKPVRNPTG AVVLLIAEAR
DISEQKRVEQ ALELSNLVVE NSQVVLFRWK AVEGWPVVMV SRNVSQFGYT PEEFLSGTLH
YASIIHPEDL DRVIREVRYF STRGVSHTHH EYRIIAKDGR VHWVVERSLV ERNNKGEIDF
FQGVVIDTTE RRHMEEELVK AQKLESVGLL AGGIAHDFNN ILTGILGNAS LAKMLFSPQD
RAYAYVSNIE SAAYRAKDLT LQFLTFSKGG APIKKPVNSV ELIRNNTQLA LSGLKSTCEL
SVPDDLRIVE VDEGQISQVI NNLIINADQA MPRGGVIRVV CENVETSASN GLPLKEGSYV
RVSVSDQGAG ITAEHRGKIF DPYFTTKDRG HGLGLASAYA IMKKHAGHIC VDSKPGAGAT
FTIYLPASDA ATAITTEEPA TAAAGSGRIL VMDDEPLVRM VTGEMLEHMG YDVEFAQNGE
EALAMYGAAR ESGVPFDAVI MDLTVPGGMG GREAIQRIRE INPNVRAIVS SGYSDDPVMA
NHLNYGFAGV VVKPYDLGEL GAQLERVLRK QE