| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2581 |
|---|
| Symbol | |
|---|
| ID | 4572689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2798108 |
|---|
| End bp | 2799388 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 639756630 |
|---|
| Product | SecC motif-containing protein |
|---|
| Protein accession | YP_902243 |
|---|
| Protein GI | 118580993 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3012] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00102594 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAG TTCTAGCCAC TGATTTTGGC ATCTGGCCTA TGTTACAGCA CTTGGAACGA
GCATCAGATC ACATGATTGC AACCAGTGAG TACTGGGCCA GACTGGCTAA CTACCTTCTC
CTTTACGACC AGATCGTCAT TCCCACAGGA AATCTTCAAA TACTTCCGGT CCTTCGCCTC
ATGGTGGGCG AAGCAGCATT CGATGAGCTT GTCCGAACGA GGAGCATAGT CTTCGCCAGG
TTTGACCAAT GGTTCGGCTA TGCAGGAAAC GGTGAAGGCT TAGTTTATTT CCAGATATCA
GATGGCCCCA ATCACCCCAC AAGCACTCCA AATATCGCAA CAGCCTTCTT TAAGCCACTT
GACTTAGCAA TCACTGACAT GTTGTCAGCT TCAAACCTTC CATCCACAGC TGAACGTAAA
GCAGAGATCA AAAACCTATT ACTGGACAAT GTTGTACAGC TTCCTACACC GGTTATTACT
GAAGGACTCA GGGACGAATC ATACAAGGAC GTATTGGGTA GCCCACACCT TAGGGACTTC
CTTTCGCTCC GAAACTCTGG TCGATCATTG GATGCCTTGC GTGATATCAG GCCTGATCAA
ATGGTGGTGT TCAACCCCCA CGTACCACCT GAACCGAACT CTTCACGCGA AATACGGGCT
GTGCTACGAG TTGTTTTTGA GAACTTCTTG CTTAGTATCG GAGGTCATGT CGAATCGACT
GAAATAACTG GCGATGCCGA CACACTAAAT GTCCTTCTCG CAAAGGGACA ACGACTAGGT
TATTCACCAG AGGGCAATCA AGCATTCGCT CAGATCCAGA AAATTAGCGG TGTGCCTGAC
CTCGGTGCAG CATTTGCTGC AAAGCAAATT TCTCCAACGC AACTACTCGA CCTTCGCAAT
TCCAAGCATG CACAAGCTTT AAGAGACTGG TTCGCCCTTG GAGCACCAAG TGCAACAGAG
GAAGAGACTG TCCGTAGGTA TATAGAGACA ATTGGTAAAC CTGGTTTAGT CGATTCAGTA
CCTACGAAGA TCCTCCGATT TGCAACCACA GCAGGGTTAG GTGCAATAGA GCCCATCACT
GGTGCTATCG CTTCGGCTGC TGATACCTTC TTATTGAGTA AGTGGTTCCC TGGAAAATCA
CCACGCCTAT TTATGAAACA AGCAAAGGTG ATGCTCACTA ACTCACCAGT GATCCAGCCA
CCATTGATGC GAGGCAGAGA TCGGAACAAA CCATGCTCCT GCGGTAGCGG GAAAAAATTC
AAAAAGTGCT GCGGTCGGTA G
|
|---|
| Protein sequence | MRRVLATDFG IWPMLQHLER ASDHMIATSE YWARLANYLL LYDQIVIPTG NLQILPVLRL
MVGEAAFDEL VRTRSIVFAR FDQWFGYAGN GEGLVYFQIS DGPNHPTSTP NIATAFFKPL
DLAITDMLSA SNLPSTAERK AEIKNLLLDN VVQLPTPVIT EGLRDESYKD VLGSPHLRDF
LSLRNSGRSL DALRDIRPDQ MVVFNPHVPP EPNSSREIRA VLRVVFENFL LSIGGHVEST
EITGDADTLN VLLAKGQRLG YSPEGNQAFA QIQKISGVPD LGAAFAAKQI SPTQLLDLRN
SKHAQALRDW FALGAPSATE EETVRRYIET IGKPGLVDSV PTKILRFATT AGLGAIEPIT
GAIASAADTF LLSKWFPGKS PRLFMKQAKV MLTNSPVIQP PLMRGRDRNK PCSCGSGKKF
KKCCGR
|
|---|
| |