| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2568 |
|---|
| Symbol | |
|---|
| ID | 4572396 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2779718 |
|---|
| End bp | 2780848 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639756617 |
|---|
| Product | peptidase T-like protein |
|---|
| Protein accession | YP_902230 |
|---|
| Protein GI | 118580980 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2195] Di- and tripeptidases |
|---|
| TIGRFAM ID | [TIGR01883] peptidase T-like protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00779474 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCA TTCCACGACA CATCACTCGA CAGCGGCTCT TCGCCACATT CATGGAGCTG
TGCGCCATCG ACTCCGAACC GGGCAGGGAA CGACAGATGG CTGATTTCCT GCGGGAACGT
CTGACCGGGC TGGGCTGTTC CGTCAGCGAG GACCGGGCCG GGCAGCCGAC CAACGGAAAC
ACGGGCAACC TCCATGCCCG CCTGGAGGGA AGCGGGCCGG GCGAGGCGCT CTTTCTCTCC
TGCCACCTGG ACCGGGTCGC GCCGGGAACG GGGGTCAGGC CGCGCATCCA GGGGGAGTAT
CTGGTCAGCG ACGGCACCAC GGTACTGGGC GCGGACGACG GCGCCGGCCT GGCCGCCATC
CTGGAGGCGC TGACAACCAT CAGGGAACAC AGGATCCCCC ACCCCACTCT GGAGATCGTC
CTGACGGTGG CCGAAGAACT GGCCCTGGCC GGTGTCCGCC ATTTCGACAT CTCCCGGCTC
GAGGCGCGGT CCGGCTTCGT GCTGGACGCG GCCGGCAGGG TCGGCCAGAT CGTCGTCCAG
GCGCCGGAGA AGGTCAACTT CAGGGCGGTT TTCCACGGCA GAAGCGCCCA TGCCGGCTTT
AGCCCGGAGC AGGGCATCTC GGCAATCCAG ATGGCGGCTC TTGCCATCAG CCGCATGCGG
CTCTTGCGCA TCGATCCGGA AACCACCGTC AACCTGGGCA GCATATCCGC TCAGGGAGCA
TCCAACATCG TTCCTGAATT CTGCGAGCTC AGCGGGGAGA TTCGCTCCCT GGACCCGGCC
AAGGTGCGCG CCCAGCTGGA GGCCATCGAA CGGGCCATGG AATCGGCGGC CACCGAACTG
GGCGGCAGCA CGGAGCTGAG GGTGACGGAG CGCTACCCGG CGTACCAGCT GGCGGAAGAG
ACAAAAGCGG CCCGTCGCGC CGCCCGGGCC GCCCGACGGA TCGGCGCACC GCTCTTGTTC
ACCTCAACCG GCGGCGGGTC CGATGCCAAT ATCTTCAACA GCAGGGGCAG GGAGACCGTC
GTGCTGAGCT GCGGCTATGA GCACGCCCAC ACCACCGCGG AGCGCATCTC CCTGGAGCAG
CTCTCCCTGC TGGCGGAGTG GGTGCTGGCC CTGATCGTGG ACGACGAATG A
|
|---|
| Protein sequence | MTSIPRHITR QRLFATFMEL CAIDSEPGRE RQMADFLRER LTGLGCSVSE DRAGQPTNGN
TGNLHARLEG SGPGEALFLS CHLDRVAPGT GVRPRIQGEY LVSDGTTVLG ADDGAGLAAI
LEALTTIREH RIPHPTLEIV LTVAEELALA GVRHFDISRL EARSGFVLDA AGRVGQIVVQ
APEKVNFRAV FHGRSAHAGF SPEQGISAIQ MAALAISRMR LLRIDPETTV NLGSISAQGA
SNIVPEFCEL SGEIRSLDPA KVRAQLEAIE RAMESAATEL GGSTELRVTE RYPAYQLAEE
TKAARRAARA ARRIGAPLLF TSTGGGSDAN IFNSRGRETV VLSCGYEHAH TTAERISLEQ
LSLLAEWVLA LIVDDE
|
|---|
| |