| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2459 |
|---|
| Symbol | |
|---|
| ID | 4574033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2658986 |
|---|
| End bp | 2660458 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639756509 |
|---|
| Product | polysaccharide biosynthesis protein |
|---|
| Protein accession | YP_902122 |
|---|
| Protein GI | 118580872 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTAA AAAATTCACT CTGCGACATC AGCAAACATA GCTTGATATA TATGCTTGGA
TGGGGGATTG CCGCTGCAAT ACGATTAGGG ATGCTGCCCC TCTTCACCCG TTGCTTAGGA
CAACAGGATT ACGGAATCAT CTCTATTTTG GATAGTTCTG TTGAATTGTT ACGTATACTC
TGTGCGTTGG GATTCAGTTC TGCTATTGTG AGATTTTATA ACGACAGTAC GGATGTTTGC
TTCAGGCGCA CGGTTATGGC TACAGGCGCT TGTTTTTCCT TGCTTGCTAC TGTTTTTTTT
GGTCTTGGCA TTTTTCCTTT TAGTAAACAA ATCTCAGAAT TCATTTTAGG AAATGGGGTA
AATGTACTCT ACTTTAAACT TGCATTTGCT ACCATATTGC TCAATATAAT TAGAAGTGTT
GCTGATTCAT ATTTAACAGT TAATAAATAC TCAGTGCAAT ACATTGTAAT TAATACTGTT
CAAGTTGTGT TCCAGTCGTC ACTGAATTTA TATTTAGTTG TGTTCAGAGA TCTTGGTGTT
ACTGGAATGT TGGTAGGAAA TTTATTGGTT GCCTTTATTT TTGATGTAGG CTTGTATGCA
TTCGTAGCTT TTAAGAATGG CCTTGTCATT GATTTTAAGG TGATAATTCC AATGCTCAAA
TTTTCACTTC CTCTTGTTCC GACTGTGTTG GCTGCGGCAG CCATGCATAA CTTAGATAGA
TTTTTTATCA AGTTTTTCGC CTCAATGGAG GATGTTGGTC TTTATTCGCT GGCATATCAG
TTTCCTTTTA TGCTCAATAC TGTATTTATG AGTTCATTTG TACGGATTTG GGAGTCAAGT
TCTATCTACG AAATAGCTAA ATACCCCGAT GCCTCCTACC AATACGGCAA AATATGCACC
TATTTCATGA CAATATTGGC TTATGCTCTT CTCATTTTAG CAGTTATGTC CGATCTTGTT
ATGAAGATTT TTGCTGCACC TTCCTACTTT ACTGCGCACG AATATATTCC AATAATTTCG
TTGGGCGTCT GGGGTTATGC TTTGCATACT TTTGTACGCG TGGGTGTTAA TCTATCAAAA
AAAACGCACT TATTTACTAT AAATTACATG CTGACGCTGA TATACAACGT TGGATTGAAT
TGTCTACTTG TTCCAAAATG GGGTGCTTTT GGGGCTGCTT GGGCCACTGT TGGTACTTAT
TTCGGTTTTA GTATTGGAGG TTATATAGTC TACCGAAAGT ATAATTGTGT AAATATTGAG
TGGTCAAGGC TTGTAATGGT AGTTTTAATG GCAGTTTCAT TGGTTGCAAT AAAGCAAAAC
ACATATATAG CTAATCAATT ATATTATATT ATTTTAGAGA TATGTTTAAT CGTTCTTTTT
CCAATACTGT TGATTGCGTT TATCTTTGCT ACAAAACAAC CAGAAGTTAT AGTTATAAAA
AACATTTATG CTGCAATGCG GAAATTTATC TAA
|
|---|
| Protein sequence | MSLKNSLCDI SKHSLIYMLG WGIAAAIRLG MLPLFTRCLG QQDYGIISIL DSSVELLRIL
CALGFSSAIV RFYNDSTDVC FRRTVMATGA CFSLLATVFF GLGIFPFSKQ ISEFILGNGV
NVLYFKLAFA TILLNIIRSV ADSYLTVNKY SVQYIVINTV QVVFQSSLNL YLVVFRDLGV
TGMLVGNLLV AFIFDVGLYA FVAFKNGLVI DFKVIIPMLK FSLPLVPTVL AAAAMHNLDR
FFIKFFASME DVGLYSLAYQ FPFMLNTVFM SSFVRIWESS SIYEIAKYPD ASYQYGKICT
YFMTILAYAL LILAVMSDLV MKIFAAPSYF TAHEYIPIIS LGVWGYALHT FVRVGVNLSK
KTHLFTINYM LTLIYNVGLN CLLVPKWGAF GAAWATVGTY FGFSIGGYIV YRKYNCVNIE
WSRLVMVVLM AVSLVAIKQN TYIANQLYYI ILEICLIVLF PILLIAFIFA TKQPEVIVIK
NIYAAMRKFI
|
|---|
| |