| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2428 |
|---|
| Symbol | |
|---|
| ID | 4572727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 2628248 |
|---|
| End bp | 2629453 |
|---|
| Gene Length | 1206 bp |
|---|
| Protein Length | 401 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639756478 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_902091 |
|---|
| Protein GI | 118580841 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0637586 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTATTCT CCCGCGAGGT CTTTCACATG GAAACGGACA TTCCGGCAAT AGAAGGGGAA
ATTGAACGGA TCCTGCCCCG GGTGCGGGAC GCGCGACGCT ACCTGCATGC CCATCCTGAG
CTGTCCCTGC GCGAACATGA GACGGCGCGC TTTGTCAGAT CGAACCTGGC TTCCCCCAAC
ATCGGGCTTC TGCCGCCGTT TTTGGAAACG GATGTGGTGG CGCTGATCTC CGGTCGGCAG
CCGGGCCGGA ATGTCACCCT GCGGGCTGAT ATGGACGCCC TGCCCATGCG GGAGGAGACG
GAACTGCCCC ATTGCTCGCT CCGCGACAAT GTCATGCACG CCTGCGGACA CGACGGCCAC
ACCGCCATGC TGATGGGCGC TGCCCTGGTG CTTGAGCGCC TGAGGAACCT GTTCAGCGGG
TCGGTCAGAT GCGTGTTCCA GCCGGGTGAG GAGATCGTGG CCGCCGGCAG GGATCTGGTG
GCGGCCGGCG TTCTGGATGA TCCGAAGCCG GACGCGGTGC TGGCCTTGCA CGCCTGGCCC
GGGCATCCGA CCGGGGTAAT CGGCTCGCGC CCGGGGGTGA TGATGGCTGC CGCCGACATC
TTTAGCATCA CCATCAGGGG GAGGGGAGGG CACGGCTCGC GGCCGGAGCG CACCATCGAC
CCGATCCTGG TCGCCACCCG GGTGATCCAT AGCCTCTATG CCATCCCCTC GCGGCGCATA
GGCGCGCTGG AGCCGGTGGT GATCAGCGTC TGCAGCATGC ATGGCGGTTC CAACGCAAAC
GTCATCCCCG ACCAGGTCGT TTTGCAGGGA ACGGCGCGCT ACCTCTCCCC TGAGGGAGGT
GCGCTCCTGC CGGAGCTGTT CGAGCAGGTT CTGAAGGCGG AATGCGACTA TGCCGGCGCA
TCCTACCACC TGGAGTATCA GCGCCCCTAC ATTCCGACGC AGAATGCCGC GCGGGTCGTC
GATACCTGTC GTGAGGTTGT GCTGAGTGGT CTGGGGAGGT CGTGGTGGAA GGATATTCCC
GCCCCCAGCA TGGGTGCGGA GGATTTCTGC TGGTACCTGG AGCGGTGCGA GGGGGCCATG
TTCTTCATCG GCATGGGGGA GGAGTGCCCC CAGTTGCACA GCAACCGTTT CGATTTCAAC
GACGGGGCGC TGCGCAACGG CATCATGTTT CTGGTGCTCT CCGCCTTGAA ACTGCTTCGG
CGGTAG
|
|---|
| Protein sequence | MLFSREVFHM ETDIPAIEGE IERILPRVRD ARRYLHAHPE LSLREHETAR FVRSNLASPN
IGLLPPFLET DVVALISGRQ PGRNVTLRAD MDALPMREET ELPHCSLRDN VMHACGHDGH
TAMLMGAALV LERLRNLFSG SVRCVFQPGE EIVAAGRDLV AAGVLDDPKP DAVLALHAWP
GHPTGVIGSR PGVMMAAADI FSITIRGRGG HGSRPERTID PILVATRVIH SLYAIPSRRI
GALEPVVISV CSMHGGSNAN VIPDQVVLQG TARYLSPEGG ALLPELFEQV LKAECDYAGA
SYHLEYQRPY IPTQNAARVV DTCREVVLSG LGRSWWKDIP APSMGAEDFC WYLERCEGAM
FFIGMGEECP QLHSNRFDFN DGALRNGIMF LVLSALKLLR R
|
|---|
| |