Gene Ppro_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2358 
Symbol 
ID4575053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2549989 
End bp2552739 
Gene Length2751 bp 
Protein Length916 aa 
Translation table11 
GC content61% 
IMG OID639756409 
Productsignal transduction histidine kinase, nitrogen specific, NtrB 
Protein accessionYP_902023 
Protein GI118580773 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAG CCGCAAGAAT GCAACCATCG CAGTACCGGC CCGCACCCTC CCTCCGCGGA 
AGGACCCTTG GTGAGAGCCG CTCGAGGGTC TTCACTGCTT TCACGCTGAT ACTGTTGCTG
ATTACGAGCG TCGTTTTCCC GCTCCCATTG CCGGTGGCGG CGGAGGAGCA GCCCCCATAC
CATCTGCTGC TGCTCAATTC CTACCACCAG GGGTTCAGGT GGACCGATGA CGTCACCGCG
GCGGTTATCT CCACCATGGC CAGGGTTCCG CGAAAGGTGG AACTCCACGT CGAGTACATG
GATGAAAAAC GATTCCACAG CGACCAGCTG CTGGCTGCCC TGGAGCGGCT GTTTAGCCTG
AAGTACCGTG AGATGCGTCC GGATATCATC ATCACCTCCG ACGATGATGC CCTCAACTTC
GTGAAACGCC ACCATGCCGA ACTGTTTCCC TCCGTTCCGG TGGTCTTTTG CGGCGTCAAC
GATGTGCAGT CGGCGTTGAC GGTGCCGAAG CGATTTTTCA CCGGACTGGT CGAAACGCTT
GATATCAGGG ACAACATATC CCTGGCCATC CGTCTCTTTC CGCAAACCAG ACAAATCGTG
ATCGTCAGCG ACGGGACACC TACCGGGGTG GGCACGCGCC AGATGGCCCG GGAGAGCGAG
GCTGACTTTC CCGGCATGGA GTTCGTGTAT CTGGATGGTG AGCAGTTGTC CACACGGGAG
CTGTTGGAGC GCCTGAAGGG ATTGCGCCAG GGGAGCGTGG TTATCGCCCC GGCCTGGTAT
CGGGACCGCG ACGGCAGGGT GTTTGACAAC ACCGCCATCT ACCCGATGAT CGCCGAGGCG
TCGCCTGTGC CGGTCATGGC CACCTCCAGC GCAAACCTCG GTCTGGGGCT CTTGGGCGGC
AAAGTGAACA GCGGCGCGAT CCAGGGGCAG CATGCCGCGG AATTGGCCCT GCGCATCCTC
TCCGGCCAGG CCGTGGCGGC GGACATCCCG GTGGAGACGG CCAGCCACAA CAGGTACATG
TTCGACAGCC GGCAACTGAC CCGATTCGGC ATCGACGAGC AGCGGTTGCC CGCGGGCAGC
ATCGTGCTCC ACCGCCCCTT CTCCTTCTAC CAGGCCTACC GTCAGCTGGT ATGGAGCGTG
ATCGCGGCAT TCTGCCTGTT CACGGTCATG ATCATTGCCC TTTTGGTCAC GAACCGTCGT
TTGCGGGACG CCCGCGGGAG CCTGGCCCGC AGTGAGGAAA ACCTGCGCAT CACCATCCGT
TCCATCGGCG ATGCCGTCAT AACCACGGAT ACGTCCGGCC GGATCACCGG CATGAACCCT
GTGGCCGAGA AACTTACCGG ATGGATGTTC CCGGAGGCTG GTGGCCGGAG CCTGGGCGAA
GTGCTGCGCC TGGTCAATGC CGTCAGCAGG GAAACCTGCC CGGATCCGGT GAGTTCGGTT
CTGGCGTCGG GGGATACCAC CGCCCTGGAA ACCGACACGA TCCTGATCTC CCGGAGTGGT
GCCGAGTACC GCGTTGCCGA CTCGGGGGCT CCCATTCGCA CCAACGAGGG GGAGATTATC
GGCATCGTCC TGGTGTTCCG CGACATAACC GACGAATACC TGCGAGAGGA ACAACAGGCC
CAAAGCAGGA AGCTGGAGGC GATCGGCCAA CTGGCCGGTG GTGTGGCCCA TGATTTCAAC
AATATGTTGG GGGGGATCAT CGGCAACGCG GAGATGCTGG CGTTGAAGCT GGGCAGCGGC
CACCCCCTGC AGAAGCATGT CTCCACCATT CTCACGGCGA GCGAGAATGC CGCCGGACTC
ACTCAGCGGC TGCTGATCTT CTCGCGCAAG GGAAACGTCG TCATTGCTCC CATGGATCTG
CACCACGCCA TCGGAAATGC CCTGACTCTG CTGGAACACA GCCTGGACAA GGGAATTACC
ATCAGGCGCG AACTCAATGC CGCGCCGTCG ACCATCAAGG GAGATCCGGT CCAGATGGTC
AACTCGATCA TCAACCTGTG CGTCAATGCC GGCCATGCCA TGCCCGAGGG GGGAGTGCTG
ACCATATCCA CCGAAAACGT GGAGCTGAGC GAGGCCTACT GCCGGGATAG CTCCTTTCCC
ATTGAGCCGG GCTGTTTTGT GCGCATCGGT ATTCGGGATA CGGGCGAGGG CATACCTCAG
GATCTGCTGC CGCGAATATT CGAACCGTTC TTCACCACCA AGGGAGTCGG CAAGGGGACC
GGTTTGGGCC TGGCTGCGGT GTACGGTACG ATCAGGGAAC ATCACGGCTG TATCTGCGTG
CAGAGCGAGA AGGGCGTGGG AACCGTCTTC AACCTCTGTC TGCCGGTTAA CGACGTCAGT
CCCGCCTGCT CAGCGGAAGA AGGGGAGGCA TCCGGGACAG CGCAGCACGG CTGCATCCTG
ATTGTTGACG ACGAGGAACA GGTCAGGACG GTCGCTGCGG ATATCCTGGA GAGTCTCGGC
TATCGGGTCC TGCAGGCAAC CGATGGCCGG GAAGGGGTGG AAATCTTCGC TGCCCGTGGC
GGGGATATCG ATCTGGTTCT GCTGGACATG GTCATGCCGC GCATGGGGGG ACTGGCCTGC
TTCCGGGAGA TCCGTGCCAT TGATCCCCAT GCCAGGGTTC TGGTTACCTC CGGTTTCGCC
CGTGAGAACA GCCTGGAGGA ACTGCAGGCC GCCGGTATCA TGGGTTTTCT CCAGAAACCG
TACCGCAGGG CGGATTTGGC CCGGATGGTT GCCCAGGCGA TGTGCCGCTG A
 
Protein sequence
MSLAARMQPS QYRPAPSLRG RTLGESRSRV FTAFTLILLL ITSVVFPLPL PVAAEEQPPY 
HLLLLNSYHQ GFRWTDDVTA AVISTMARVP RKVELHVEYM DEKRFHSDQL LAALERLFSL
KYREMRPDII ITSDDDALNF VKRHHAELFP SVPVVFCGVN DVQSALTVPK RFFTGLVETL
DIRDNISLAI RLFPQTRQIV IVSDGTPTGV GTRQMARESE ADFPGMEFVY LDGEQLSTRE
LLERLKGLRQ GSVVIAPAWY RDRDGRVFDN TAIYPMIAEA SPVPVMATSS ANLGLGLLGG
KVNSGAIQGQ HAAELALRIL SGQAVAADIP VETASHNRYM FDSRQLTRFG IDEQRLPAGS
IVLHRPFSFY QAYRQLVWSV IAAFCLFTVM IIALLVTNRR LRDARGSLAR SEENLRITIR
SIGDAVITTD TSGRITGMNP VAEKLTGWMF PEAGGRSLGE VLRLVNAVSR ETCPDPVSSV
LASGDTTALE TDTILISRSG AEYRVADSGA PIRTNEGEII GIVLVFRDIT DEYLREEQQA
QSRKLEAIGQ LAGGVAHDFN NMLGGIIGNA EMLALKLGSG HPLQKHVSTI LTASENAAGL
TQRLLIFSRK GNVVIAPMDL HHAIGNALTL LEHSLDKGIT IRRELNAAPS TIKGDPVQMV
NSIINLCVNA GHAMPEGGVL TISTENVELS EAYCRDSSFP IEPGCFVRIG IRDTGEGIPQ
DLLPRIFEPF FTTKGVGKGT GLGLAAVYGT IREHHGCICV QSEKGVGTVF NLCLPVNDVS
PACSAEEGEA SGTAQHGCIL IVDDEEQVRT VAADILESLG YRVLQATDGR EGVEIFAARG
GDIDLVLLDM VMPRMGGLAC FREIRAIDPH ARVLVTSGFA RENSLEELQA AGIMGFLQKP
YRRADLARMV AQAMCR