| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2182 |
|---|
| Symbol | |
|---|
| ID | 4575097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2354831 |
|---|
| End bp | 2355880 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639756230 |
|---|
| Product | peptidase M48, Ste24p |
|---|
| Protein accession | YP_901848 |
|---|
| Protein GI | 118580598 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAG CGCCGGTCGC ATATTTTGAT GGCAAGGTTT CGACCCGCCG GGAGGCTCTG
CTCCTCCTCG ACGGAGCGCA GGTAACCATC CGCGCCAACG GTGTGGAGCG CACTTATCCG
GTAGCGGTCG TGAGCATCCC ACCGGGTGTG GGCTCGGTCC GCCGCACGCT TCGCTTGCCC
GATGGCGGTG TGTGCGAACT CCATGACCCT GAACTGCTGG CTGAACTGGA GCGTGCCTGC
GGCGGGGCGC CCGGCCAGCG CCTGCTGCAC CGCTGGGAGC AGAGCCTGCC GCTGGCAGCG
GGGGCATTGT TCCTGACCGT GCTGACAGTA TTCCTGTTCC TGCGCTACGG CCTGCCCACC
CTTGCCCAGC GGGCGTCCCT GGCCCTGCCG ATTTCCACGG AACGCACCCT GGGGCGCGAA
TCCCTGGCCA CCCTGGACCG TGTCCTGATG CACCCTTCCA CCCTCGGCAA GGAGCGCCGC
CATGAACTGA CCCAGCTGTT CCGGCGCGTT GCCGGAGCAG GGGCGGATGG CGCGGGCTAT
CGTCTTGAAT TCCGTTCCTC CCCGAAGCTC GGGGCCAATG CCCTTGCACT CCCCTCGGGA
ATCGTGATCA TCACCGACGA CCTGGTCAGG TTGGCCAGAG AGGACAACGA ACTTGCCGCC
ATCATGGCCC ACGAACTGGG ACACGTACGC GGTCGCCACG TCCTGCGCCA CATCCTGCAG
AGTTCCGCCT CCGGCCTGAT CCTGGCCACC CTGACCGGCG ACCTGGTGTC GATAACCTCA
CTGGCAGCCA CCCTGCCAAC GGCCCTGGTG AATGCCTCCT TTTCCCGGGA TTTCGAACGA
GAGGCGGATG ACGCCGCCAT CGCCTGGATG AAGTCGTCCG GCGTGCCGTT GCGCTGCTAT
GCCGACATAC TGGGGCGCCT GCAGGCACAG CTCAATGTCC GCAGTGGCGG AACGAACGGC
AGCGACTCTG CGGTGCGCAA CTATCTCTCC ACCCACCCGG ACACCGGGGA GCGGATCCGG
CGGATACTGA ATGAAGCGGC GCACGAGTAA
|
|---|
| Protein sequence | MKSAPVAYFD GKVSTRREAL LLLDGAQVTI RANGVERTYP VAVVSIPPGV GSVRRTLRLP
DGGVCELHDP ELLAELERAC GGAPGQRLLH RWEQSLPLAA GALFLTVLTV FLFLRYGLPT
LAQRASLALP ISTERTLGRE SLATLDRVLM HPSTLGKERR HELTQLFRRV AGAGADGAGY
RLEFRSSPKL GANALALPSG IVIITDDLVR LAREDNELAA IMAHELGHVR GRHVLRHILQ
SSASGLILAT LTGDLVSITS LAATLPTALV NASFSRDFER EADDAAIAWM KSSGVPLRCY
ADILGRLQAQ LNVRSGGTNG SDSAVRNYLS THPDTGERIR RILNEAAHE
|
|---|
| |