| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2068 |
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| Symbol | |
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| ID | 4573708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 2218329 |
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| End bp | 2221883 |
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| Gene Length | 3555 bp |
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| Protein Length | 1184 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639756114 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_901734 |
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| Protein GI | 118580484 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc)
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00797778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCAT CCGAAACCAG CCAGCACCCC CCTCAAGCCC CCTTCGTCCA TCTTCATGTT
CACACCCAGT ACTCGCTGCT GGACGGCGCC ATCCGCCTGG AGGACCTGAT CGCCAAGGCC
AAGGCCCACA ACATGCCGGC CCTGGCCATC ACCGACCACG GCAACATGTT CGGCGCCGTG
GAATTCTACC TGAAATGCAA GAAGGCCGGC ATCAAGCCGC TGATCGGTTG CGAGGTGTAC
ATCGCCCCCG ACTCCCGCTT CTCCCGCGAG AGCACCAGGG GCATCTCCGA AGCTGCCTAC
CACCTGATTC TTTTATGCGA AAACATGCAG GGTTACCGGA ACCTCTCCTA CCTGACCTCA
GCCGGCTACA AGGAGGGATT CTACTACCGT CCCCGCATCG ACCGCGAGCT GCTGCAGGAG
CATAGCGAGG GGCTGATCGC CCTGTCGGCC TGTCTCAAAG GTGAGGTTGC CATGCAGTGC
TTCCGGGACC GTATGGACGA CGCCCTGGAG ACCGCCCGCT GGTACAGTCA GCTCTTCCCG
GATCGTTACT ACATCGAGCT GCAGGAGAAC ACCCTTCCCG AGCAGGACGT CGTCAACAAG
CGCCTGATGG AGGTGGCCGC GACGCTTCAG CTGCCGCTGG TTGCCACCAA CGACTGCCAC
TACCTGAACC GCGAGGATGC CCGCGCCCAC GAGGTGCTGC TCTGCATCCA GACCGGCAAG
ACCATGAGCG ATCCCAGCCA CATGAAGTTC TCGGCGGAGG AGTTCTATGT CAAGAGCCCG
GAGGAGATGG TCGCCGCCTT CGGCTACGCC CCCGAGGCGG TGTCCAACAC CCTGAAAATC
GCCGATCGCT GCGACCTGAA GCTCCCCCTG GACACCGGTG AGTACCACTT CCCCCACTTC
GACCCGCCAG CCGGCAAGAA CCACGACGAT ATGCTGGAGG AGCTGGCCGT GCAGGGGTTG
AAGGAACGCA TGGTCACCAT CCTGGCCAAA TACCCGGACA TGAGCCTGGA GCGCCGGCAG
GCCTACTTTG AACGTCTGCA GATCGAACTG AAGTGCATCC GCGAGATGCA GTTCCCGGCC
TACTTCCTGA TTGTGTCCGA CTTCATCACC TGGGCCAAGA ACAAGGGCAT CCCGGTGGGA
CCGGGCAGGG GTTCGGCCGC GGGATCGCTC GTGGCCTACG CCATCCGCAT CACCGACCTG
GACCCACTGC CCTACAACCT GCTGTTCGAG CGCTTCCTCA ACCCGGAACG CATCACCATG
CCCGATATAG ACGTGGACTT CTGCCAGGAC CGCCGCGAAG AGGTGATCCA GTACGTGATT
GAGAAGTACG GCCGGGAGCG GGTCTGCCAA ATCATCACCT TCGGGACCAT GAAGGCCAAG
GCGGTGGTGC GCGACGTTGG CCGTGCCCTG AACATGACCT ACGGCGACGT GGACAGGATC
GCCAAGCTGA TCCCGGACGA CCTGAAGATG ACCCTGGCCA AGGCGCTCAA GCAGGAGCCG
CAACTGAATG AGATGGCGGA ACGCGATCCC CAGGTCAGGG ACCTGCTGGA CACGGCCCTC
TGTCTGGAGG GACTGACCCG CCACGCATCC ACCCACGCCG CCGGCGTGGT GGTGGCCCCC
CGCCAGCTGG AGGAATTCTT GCCGGTGTAC AAGGACCAGA AGACCGGCTC CATCAACACC
CAGTACTCCA TGAAGTACGT GGAGATGGTA GGCCTGGTGA AGTTCGACTT CCTGGGCTTA
AAGAACCTGA CCGTGATCGA AAACGCGGTC CATCTTGTGC GGGCCGGCAA GGATCCGGAT
TTCGACATCA CCCGCCTCAG GGACGACGAC AGTGAGAGCT ATGACCTGAT CTCCAGCGGC
AACACCACCG GCATCTTCCA GCTGGAATCC AGCGGCATGA AGGAGATGCT GGTCAAGTTG
AAACCTTCCT GCTTCGAGGA CGTGATCGCC GCCTGCGCCC TCTACCGCCC CGGCCCCCTG
GGGTGCGGCA TGGTGGACGA GTTCATCGAG CGCAAGCATG GCCGCCAGAA GGTTGTCTAC
GACCTGCCAC AGTTGGAGCC GATCCTGAAA GACACCTATG GGGTCATCGT CTATCAGGAA
CAGGTCATGC AGATCTCGCG CACCCTGGCC GGCTACTCCC TGGGCCGCGC CGACCTCTTG
CGCCGCGCCA TGGGCAAGAA GGATCCCGCG GTCATGGCCA AGGAGAAGGA ACCGTTCCTG
GAGGGGGCCA AGGCCCAGGG GATCGACCCC AAGAAAGCCG AGGCGATTTT CGACCAGATG
GCCAAGTTCG CCGAATATGG CTTCAACAAG TCCCACTCGG CAGCCTATGC CCTGATCGCC
TACCAGACAG CCTGGCTCAA GTCCCACTAC CCGGTGGAGT TCCTGGCTGC GCTCCTGACC
TGCGACATGG ACAGCACCGA CAAGGTGATC AAGAACATCA ACGACTGCCG CGAACAGGGG
ATCGAGGTGC TGCCGCCGGA TGTGAACAAG TCCGGACTCA CCTTCACCGT GGTGGGCAAC
TCCATGCGCT TCGGTCTTGG GGCGGTCAAG GGGGTCGGCA CCGGCGCGGT GGAGGCCATC
CTGGAGGCCC GCCAGGATGG CCCCTTCAAG GATGTCTACG ACTTCTGCGA GCGGGTTGAC
ATGCGCCGCT CTAACAAGAA GGTTCTGGAG GCGCTGATCA AGTGCGGCGC CTTCGACTCC
ACCAACGCCC CCCGGGCGGC TATGATGGAG GGGCTGGAAA CGGCCATGAA CTTCGGCCAG
CGCATCCAGC AGGAGCGTGC CAGCGCCCAG GTTTCACTGT TCGGCGACGA CGAGGTGGCG
CGGAGCGGCG GTAACGGCCA CAGGCTCCCC GACGTACCGG AATGGCACGA CAAGGAGAAG
CTGGCCCTGG AGAAGGAGGC CCTGGGCTTC CTGATCACCG GCCATCCCCT GGACCGCTAC
GTGGACGACA TCAAGCGGCT GAACTGCGTG GAGATTTCCC GCCTGACGGA ACAGGCCGAC
GGCGGCGAGA TACGGGTCTG CGGAATCGTT TCCTCTCTTA AGGAGATCAC CACCAAGAAG
GGTGACCGCA TGGGTTTCGT TACCATCGAG GATCTGACCG GTTCCGTGGA GGTGACGGTC
TTTTCGGACA TCTACACAAG CGCCGTCTCC CTGCTGAAAG GGGACGACCC CCTGCTGATC
GACGGCAAGC TGGAGCGGGG AGAGAAAGGA GCCAAGATAC TGGTGCGCGG CCAGAGCGAA
GGAGCCAGCG AATGGCAGCT GAAACAGCGC GGCCCGGCCG GCGACATCCG CCACCTGCTG
GACGTGCGTG CCCAGAGCAC CAAACGGGTC GTATTCACCC TGCTCACGGA CGAGACCCCG
CCGGAGCACC TGGAGGTTCT GAAAGGGATC ATTGAGCGCC ACCAGGGGAG CGTGCCGACG
GAAATCCAGT TCCTGATTCC CCAGCGCAGC CGGTCCACCC TGGCGCTGCC GGAAAGCATG
AATGTGGCGG CCAGCGATGA TTTAAGGCTG GAAGTGGAAC GGTTGTTCGG CTATAATGCC
GCTTCTTTCG AGTGA
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| Protein sequence | MEPSETSQHP PQAPFVHLHV HTQYSLLDGA IRLEDLIAKA KAHNMPALAI TDHGNMFGAV
EFYLKCKKAG IKPLIGCEVY IAPDSRFSRE STRGISEAAY HLILLCENMQ GYRNLSYLTS
AGYKEGFYYR PRIDRELLQE HSEGLIALSA CLKGEVAMQC FRDRMDDALE TARWYSQLFP
DRYYIELQEN TLPEQDVVNK RLMEVAATLQ LPLVATNDCH YLNREDARAH EVLLCIQTGK
TMSDPSHMKF SAEEFYVKSP EEMVAAFGYA PEAVSNTLKI ADRCDLKLPL DTGEYHFPHF
DPPAGKNHDD MLEELAVQGL KERMVTILAK YPDMSLERRQ AYFERLQIEL KCIREMQFPA
YFLIVSDFIT WAKNKGIPVG PGRGSAAGSL VAYAIRITDL DPLPYNLLFE RFLNPERITM
PDIDVDFCQD RREEVIQYVI EKYGRERVCQ IITFGTMKAK AVVRDVGRAL NMTYGDVDRI
AKLIPDDLKM TLAKALKQEP QLNEMAERDP QVRDLLDTAL CLEGLTRHAS THAAGVVVAP
RQLEEFLPVY KDQKTGSINT QYSMKYVEMV GLVKFDFLGL KNLTVIENAV HLVRAGKDPD
FDITRLRDDD SESYDLISSG NTTGIFQLES SGMKEMLVKL KPSCFEDVIA ACALYRPGPL
GCGMVDEFIE RKHGRQKVVY DLPQLEPILK DTYGVIVYQE QVMQISRTLA GYSLGRADLL
RRAMGKKDPA VMAKEKEPFL EGAKAQGIDP KKAEAIFDQM AKFAEYGFNK SHSAAYALIA
YQTAWLKSHY PVEFLAALLT CDMDSTDKVI KNINDCREQG IEVLPPDVNK SGLTFTVVGN
SMRFGLGAVK GVGTGAVEAI LEARQDGPFK DVYDFCERVD MRRSNKKVLE ALIKCGAFDS
TNAPRAAMME GLETAMNFGQ RIQQERASAQ VSLFGDDEVA RSGGNGHRLP DVPEWHDKEK
LALEKEALGF LITGHPLDRY VDDIKRLNCV EISRLTEQAD GGEIRVCGIV SSLKEITTKK
GDRMGFVTIE DLTGSVEVTV FSDIYTSAVS LLKGDDPLLI DGKLERGEKG AKILVRGQSE
GASEWQLKQR GPAGDIRHLL DVRAQSTKRV VFTLLTDETP PEHLEVLKGI IERHQGSVPT
EIQFLIPQRS RSTLALPESM NVAASDDLRL EVERLFGYNA ASFE
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