Gene Ppro_2061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2061 
Symbol 
ID4573904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2209293 
End bp2211509 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content61% 
IMG OID639756107 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_901727 
Protein GI118580477 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTT GCCACACACT TCACGACATG CGCACGGCGC TGACCGAACT GGAAGAGGCG 
CTGTCAGGCC TCGACACCCC GGACGTGACC ATTCGACAAC TGGAAGAGGC GCTGCAACTG
ATGCGCAGGG CTCGGGCAGA GCTCCAGCCC ACAGTAACCT GCACGGAAGC GCCTTTCAGG
GCGCCGAAGG ATGGCGGTAT GGAGCGGTGC TCCACATACG ACCGGGAATA CCGCACCCTG
CTGCCGGATG GCAAGGTGCG TTGGATCAAC ACCCAGGGTA CGACCATCCC CAATCCCCAG
GGGCATGGGC AGCCCATGAC CGGCATCAGC ATCGATGTCT CCGACCGCCA GCGGGCGGAT
GATTCGCTGC GCCGCAGCGA AGAACGCTAC CGTTCCCTGG TGGAGCTTTC CCCCGACGCC
GTCTTCATCA ACCTCAAAAA CCGCATCGTG TTCGTCAACC CGGCGGCGGT GCGCCTCTTC
GGCGCCGCAT CGGCCCAGCA GCTCCTGGGC AAGAGCCCCT TCGACCTGAT GCACCCCGAC
TGCCACGACG TGATCCGTGC GCGCATTGAA CAGCAACGCG CGGGCCAGAT CGCACAGCTG
ATAGAGGAAA AGGTCCTGCG CCTGGACAGC AGCGTTATTG ATGTGGAGGT TTCCGCGGCC
CCGCTCAACA CGGAAGAGGG AACCGCGTTC CAGGTCATCC TGCGCGATAT CAGCGACCGC
AAAAGAGCTG AGCAGGCCCT GGCTACGGCC AAGGAGCAGG CCGAGGCGGC CAGCCGCGCC
AAGAGCGAAT TTCTGGCCAA CATGAGCCAT GAAATCCGCA GTCCCATGAA CGGCATCATG
GGCATGGCAC AGCTCATGGA GTACACCGAA CTCACCGACG AGCAGCGGGA ATACCTGAAT
GTGATCAGGT CATCCTCCCA TGGCCTGCTC TCCCTGATCA ACAACATACT CGATCTCTCC
AAGATAGAAG CGGGCAAAAT CGAACTAGAA CGGAGTGATT TCAGCCTGCG GGCCAGCATC
GACGACATCG TCAAAGCCCA CCTCTCCCAG ATTCACGACA AAGGGCTCAC CATACGCACC
GACATCCCGG CCGCCGCGCC GGACACCCTG ATCGGCGACC AACTGCGCCT GAAACAGATC
CTGCTCAACC TTCTGGGCAA TGCCATCAAG TTCACCTGCC GGGGAGGCAT CGGCATCTCG
GTCGCTGTCA GCGAGCGCCG CGACGAAAGA GTCCGGCTGA GAATCGACGT AACGGACACC
GGCATCGGCA TCCCCACCGA TGCCATGGAG AGAATCTTCA AGCCGTTTAC CCAGGCCGAC
TCTTCCACCA CGCGGCAGTA CGGCGGAACC GGTCTCGGCC TCTCCATCTG CAGCCGCCTG
GCGGAGTTGA TGGATGGCAA GATCACAGTG GAAAGCAGGG AGGGCAGCGG CAGCACCTTC
TCGGTCCATC TCCCCTTCGC GGTCAGTGGA ACCGCCATGG AGCGCCGAAG TGGCGGCAGC
AGCCAACGGG CGCGCGCCAG CTGGGATGGT CCGGCGTTGC ACATACTGCT GGTGGATGAT
TATGAGATGA ATCTGCTGGC TGTCACACGG CTGCTGCAGC GCCACGGTCA CACCGTGGTT
CCGGCTCGCG ATGGCGCGGA GGCCGTGCAA AAATGGGAGC AGGAAGCATT CGACGCGATC
CTGATGGATA TACAGATGCC GGTCATGGAC GGCATGGAGG CTACGCGGAC CATCCGGCGC
AGGGAAGCGG GGACCGGCAG GCACACGCCG GTTATCGCGC TTACCGGGCG TGCCCTCCAG
GAGGAGCAGG ACGAGATCAT GGGCCAGGGT TTCGACGGTC ATATCTCCAA GCCGATCCAG
TTGGGCATGC TGTTCCAGGA GCTGCGCAGG TGCCTGCCGC ATGCAACCAA GGAGGAGGAA
ACGATCCTTC CGTCAAAGGA GACTCCCTCG ACCGTTGTCG ACAGGCAACT ACTGGCAAGG
CTGCTGGGCA AGATGGAGCT CCTGCTGTCC AGCCACAATC TGGCGACCAT CGATTTGCTC
TCCGATATTA TGAAAACAGC GCCGCCTACC GCTGCGCTGA AGATCTTCCG GGACCATCTC
AAACGCTTCA ATTTTGACGG GGCATTGGGC TGCCTGGACG AGCTGTACCG CGAGTTCGAT
ATTACACGTG AGACGGGAAA CTTCCATGGA GAGACAGAGA ATCCTGATCG TCGATGA
 
Protein sequence
MDTCHTLHDM RTALTELEEA LSGLDTPDVT IRQLEEALQL MRRARAELQP TVTCTEAPFR 
APKDGGMERC STYDREYRTL LPDGKVRWIN TQGTTIPNPQ GHGQPMTGIS IDVSDRQRAD
DSLRRSEERY RSLVELSPDA VFINLKNRIV FVNPAAVRLF GAASAQQLLG KSPFDLMHPD
CHDVIRARIE QQRAGQIAQL IEEKVLRLDS SVIDVEVSAA PLNTEEGTAF QVILRDISDR
KRAEQALATA KEQAEAASRA KSEFLANMSH EIRSPMNGIM GMAQLMEYTE LTDEQREYLN
VIRSSSHGLL SLINNILDLS KIEAGKIELE RSDFSLRASI DDIVKAHLSQ IHDKGLTIRT
DIPAAAPDTL IGDQLRLKQI LLNLLGNAIK FTCRGGIGIS VAVSERRDER VRLRIDVTDT
GIGIPTDAME RIFKPFTQAD SSTTRQYGGT GLGLSICSRL AELMDGKITV ESREGSGSTF
SVHLPFAVSG TAMERRSGGS SQRARASWDG PALHILLVDD YEMNLLAVTR LLQRHGHTVV
PARDGAEAVQ KWEQEAFDAI LMDIQMPVMD GMEATRTIRR REAGTGRHTP VIALTGRALQ
EEQDEIMGQG FDGHISKPIQ LGMLFQELRR CLPHATKEEE TILPSKETPS TVVDRQLLAR
LLGKMELLLS SHNLATIDLL SDIMKTAPPT AALKIFRDHL KRFNFDGALG CLDELYREFD
ITRETGNFHG ETENPDRR