Gene Ppro_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2019 
Symbol 
ID4574688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2168575 
End bp2169402 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content58% 
IMG OID639756065 
Producthypothetical protein 
Protein accessionYP_901685 
Protein GI118580435 
COG category[R] General function prediction only 
COG ID[COG1427] Predicted periplasmic solute-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000126009 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCGAA TCGGACGTAT AGAATACGCC AACTGCACCC CGCTCTTTCA TGCCCTGAAT 
GCGCTTTTTC CGGAGAACGA CTACCGTTAC GTCGGCGGGG TCCCGGCATA CCTGAACGGA
ATGCTGGCGT CGGGAGGGAT CGATGTCTGC CCCTCTTCAT CGATCACCTT TGCCACCCAT
TCCGACCAGT ACCTGATCAT TCCCGATATC TCCATCAGCA GCAGCGGTCC GGTGCTGAGT
GTGCTGCTCT TTTCAAAAAC GCCCATTGAG GATCTGGATG GCGCACAGGT GCTGCTCAGT
TCGGAGTCAG CCACCTCCGT CAACCTGCTG AAAATCCTGC TCCGTATCCG TTACAACTGC
CAATGTACCT TCCAGATAAC CGATCAGAGC ACCCCTGGTG CCATGGGCGG GAACGAGGCG
ATCCTTCTGA TCGGTGACGC GGCTCTGCGC GCGACCATGA GCAGGCACGA CATGTTTGTC
TACGATCTGG GAGAACTCTG GTACCGGTGG ACCGGCACCC CCTTTGTCTT TGCCCTCTGG
CTGACCACTC GGGAGGTGGC GGGCAGACGG GGGGATGAGC TGATGAGACT TGCGCGACAG
TTGGGCCATG CCAAACAGTA TGCGGAAGAA CATCTGGAGG AAATCGTTCG CGTATCGCCG
GAGCGGGATT GGATGGGGCC TGAGTTGCTT TTGGACTACT GGAGGAACAA TATATCCTAC
GATCTGACGG ATCTGCACCT GTCAGGATTG AAACGCTACT TCCGTTTCGC GGCGGAGATC
GGCCTGATCG CGCCGGTGCG GGATCTCGCC TTTCTGCCCC TGGATTGA
 
Protein sequence
MLRIGRIEYA NCTPLFHALN ALFPENDYRY VGGVPAYLNG MLASGGIDVC PSSSITFATH 
SDQYLIIPDI SISSSGPVLS VLLFSKTPIE DLDGAQVLLS SESATSVNLL KILLRIRYNC
QCTFQITDQS TPGAMGGNEA ILLIGDAALR ATMSRHDMFV YDLGELWYRW TGTPFVFALW
LTTREVAGRR GDELMRLARQ LGHAKQYAEE HLEEIVRVSP ERDWMGPELL LDYWRNNISY
DLTDLHLSGL KRYFRFAAEI GLIAPVRDLA FLPLD