| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1985 |
|---|
| Symbol | |
|---|
| ID | 4572257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2127628 |
|---|
| End bp | 2128785 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639756031 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_901651 |
|---|
| Protein GI | 118580401 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTCG CTAAGCTGCT CTTCAGAAAT GCCTTCCGCC ACCGCCTGCG CACCTCCCTG
ACGATCCTCG GCATCACCAT CGCCATCCTC TCCTTCGGCA TGCTGCGCAC GGTGATCAGC
GCCTGGTACG CCGGCGTGGA CGCCTCGTCC GCCAGCCGCC TGGTCACCCG CAACGCCATC
TCCCTGGTAT TCTCCCTGCC CCTCTCCTAC AAAGAGCGCA TCCGCCAGGT TGACGGCGTC
CAGCAGGTCT CCTACGGCAG CTGGTTCGGC GGCCTCTACA TCGACGAAAA GAACTTCTTC
CCCAACTTCG CCGTGGAAAC CGAGCAGTAC CTGAAGCTCT ACCCCGAGTA CGTCCTATCC
CCGGAACAGC TGGCCGCCAC CATCCGCGAC CGCAAGGGGT GCGTGGCCGG CCGCAAGCTG
GCGGAGCGCT TCCGTTGGAA GATCGGCGAC AGCATCGTGC TCAAGGGAAC CATCTATCCG
GGTGAATGGG AGTTCGTGCT GCGGGGCATC TACCGGGGCA GGGAAAAGAC CGTGGACGAG
ACCCAGCTGT TCTTCAACTG GGACTACCTG AACGAGACCA TGAAGAAGAC GGTGCCCCGC
CGGGCCAATC AGGTGGGCTT CTACATGGTC GGGGTGACCT CCCCCAGCAG GGCGGCGGAT
GTGGCCCTGG CCATCGACCG GCTCTTCAGG AACTCCCTGG CCGAGACCCT GACCGAGACG
GAGAAGGCCT TCCAGCTGGG CTTCATCTCC ATGACCGAGG CGATCGTCAT CGCCATCCAG
CTGGTCTCCT TCGTGGTGAT CGTCATCATC ATGGCGGTGG TGGCCAACAC CATGGCCATG
ACGGCGCGGG AACGCATCGC TGAGTACGCG GTGTTCAAGA CCCTGGGCTT CCGCGGCTAC
CACATCGCCG GCCTGATCCT GGGCGAATCG CTGCTGATCA CCATGACCGG CTGCATCCTG
GGCATCGCCC TCACCTTTCC GGCTGCCAGC GCCTTCGGCA GCGCCCTGTC CGCCTACTTC
CCGATCTTCA ACGTGGCCCC CTCCACAATC TGGCTGGACC TTCTGGCAGC CCTGCTGGTG
GCGCTGGTGG CGGCGATCTT CCCCGCCTGG CGCGCCACGA CCATCCCCAT CGCCGATGGC
CTGCGGAGGA TCGGCTGA
|
|---|
| Protein sequence | MHLAKLLFRN AFRHRLRTSL TILGITIAIL SFGMLRTVIS AWYAGVDASS ASRLVTRNAI
SLVFSLPLSY KERIRQVDGV QQVSYGSWFG GLYIDEKNFF PNFAVETEQY LKLYPEYVLS
PEQLAATIRD RKGCVAGRKL AERFRWKIGD SIVLKGTIYP GEWEFVLRGI YRGREKTVDE
TQLFFNWDYL NETMKKTVPR RANQVGFYMV GVTSPSRAAD VALAIDRLFR NSLAETLTET
EKAFQLGFIS MTEAIVIAIQ LVSFVVIVII MAVVANTMAM TARERIAEYA VFKTLGFRGY
HIAGLILGES LLITMTGCIL GIALTFPAAS AFGSALSAYF PIFNVAPSTI WLDLLAALLV
ALVAAIFPAW RATTIPIADG LRRIG
|
|---|
| |