| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1756 |
|---|
| Symbol | |
|---|
| ID | 4571735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1888234 |
|---|
| End bp | 1889271 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639755804 |
|---|
| Product | replication initiation factor |
|---|
| Protein accession | YP_901426 |
|---|
| Protein GI | 118580176 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2946] Putative phage replication protein RstA |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGT CTAGTAACAC GGGGGCTAAA AATACATCCC TCGTTCCTTC TGAGAATCGG
GCTTTGATTG ATTGGCTCGC CTGGACTGTC AAAGAGTTTG ACCCCCACGC CGCTATTGCC
AGTCTTGGCC TATCGTTCCT TCCGTTCCAG GCTTCCCCAG GTGGTGGCAT GGGCTACCGC
TCAACCTTGC GCTGCGGTCA TATTACCGTT TTTTTCGATG GTGCCGAAAA TATGGGATGT
CATTTCGTTA TGTCCGGTCA AGGGTGCCGT GAGTTTGAAG GGCGAGTCAA AAACTCGAAA
AATCGAACTG TTGCGTGGTA TCGCCTCATG CACTCGTTAC AGGCTGCCGG TGCCAATATC
ACCCGCATTG ACTTGGCAGT TGATACCGTG GATGGTTCGC TGCCCCTTGA AAACGTCGAA
AAGTCGGTTC GTGAACGTCG GGTTCAAAGC CGTTTCCGTG AGGCGATGAT GTACGAGAAA
ATTGCTTTGA CTGACACGGA AAAGCCCACA GGCAAAACGA TCTATCTCGG GTCGTCCCAG
GGCAAAATCA AAATTCGCTT TTACGACAAG ATGGCCGAGC GTGGCCTTTC CCCCGATCTT
GGCTCCTGGG TTCGTGCCGA GGTTCAGTGC ATGGCTGAAC GCGCCGCTGC CGTAGTTATG
CACCTGTGCA AAGGTGTTGA GTTCGGTGAG CTCGTAGTCT CCTGCCTGAA TACCTATTAC
CGCCCCATTA ATGCCGAATC CGTCAACAAG TCTCATTGTT CAACTCAGGA CTGGTGGTCT
GCATGGCTCA CCACCACTGA GAAAATCCGC CTCACATCCG CGAAAGCGGT CAAATACGTT
ACCGACAGCA TGGAGTACGT CAAACGCCAG TACGGCGCAA CCTTCGCCAT GTTCAAAAAA
TATCTCGGTG TTGCTGCCTT CTCCGATTTT ATGCATGACC TTGTTTCCAC AGGTCGCGAC
AGAATGAGTC GCAAGCATAC CGACATGATC GAAATAACGA ATCTCTCCGA ATTATTGCCC
CCATACCATG CATTTTAA
|
|---|
| Protein sequence | MPPSSNTGAK NTSLVPSENR ALIDWLAWTV KEFDPHAAIA SLGLSFLPFQ ASPGGGMGYR
STLRCGHITV FFDGAENMGC HFVMSGQGCR EFEGRVKNSK NRTVAWYRLM HSLQAAGANI
TRIDLAVDTV DGSLPLENVE KSVRERRVQS RFREAMMYEK IALTDTEKPT GKTIYLGSSQ
GKIKIRFYDK MAERGLSPDL GSWVRAEVQC MAERAAAVVM HLCKGVEFGE LVVSCLNTYY
RPINAESVNK SHCSTQDWWS AWLTTTEKIR LTSAKAVKYV TDSMEYVKRQ YGATFAMFKK
YLGVAAFSDF MHDLVSTGRD RMSRKHTDMI EITNLSELLP PYHAF
|
|---|
| |