| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1701 |
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| Symbol | |
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| ID | 4572437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 1827501 |
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| End bp | 1828703 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639755749 |
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| Product | pseudouridylate synthase |
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| Protein accession | YP_901372 |
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| Protein GI | 118580122 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000153174 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGC AGCGCTATCT GACCGCCCAT CTGCCGGGGT GCGGCGGGGT CATCAAACAG
TCTCCCGACG ATTTCATTGT CACGGAGATC CCGGCCTATG AGCCGTGCGG TTCCGGCGAG
CACCTCTACC TGACCATCGA GAAGCGCGGC CTGACCACGC TGGAGGCCAT ACGCCTGATC
GCCCGCAGCT TAAGCCTGCC GGAGCGGGAG ATCGGCTACG CCGGCATGAA GGACAGCGTC
GGCGTCACCC GCCAGACCAT CTCCGTGCCC CGCATCCGGC CGGAGGAGGT TGCCGGACTC
AGTCTGAAGG GGGTGCAACT GATCTCGGCA CTGCGTCATA CCAACAAGCT TAAGCTGGGG
CACCTGAAGG GCAACCGCTT CAACCTGGTC GTGCGCTCCG TTAACGAAGG GGCTCTTGCG
GCGGCATCGG CCATACTCAA GGTTCTCGTG GAGCGGGGAG TGCCCAACCG CTTCGGCTAC
CAGCGTTACG GTGTTCAGGG TAATTCCCAT CTTATCGGCG CTGCCATGCT GCGGGGCGAC
TGGAAGGGGG CCGTGGATCT GCTCATGGGG GATCCCCAGT TGCTGCGTGA CGACCAGTGG
CGATCCGCCA TCCAGGCTTA CCAGCGGGGA GACGTGGCTG AGGCGCTGCG CCTGCTGCCC
CGCCACTGCG ACTGTGAACG GAGCGTGCTA CAGCGTCTGG TTTCCCGGCC AGGCGCCTGG
GAAAAGGCTT TTGGCGCCGT CCACCCCCGC CTGAGGAAAC TGTACCTCTC CGCCTATCAG
TCCAGCCTCT TCGACCGGGT CGTGGAAGAG CGACTCGACC GCATCGACCG GGTCATGGAG
GGGGATCTGG CCTGGAAGCA TGTCAACGGA GCCTGTTTCC TGGTGGAGGA TCAGGAACAG
GAGCAGCCGC GGGCCGAGCG CTTCGAGATC TCCCCGAGCG GGCCGATGTT CGGCACGAAA
ATGATGCAGC CCCAAGGAGA GCCGCGTAAC ATGGAAGAGC GTATCCTGGC GGAGGAAGGG
CTCACCCTCG ATTCCTTCGG GGCACAGAGC GGAGTCGCCA TGGAGGGGCA GCGCAGGGCG
TTGCGGGTGC CGCTGGGCAA TCCTTCCTGC AGCCAGGAGG GGAGTAGCCT GTGTCTGGAA
TTTTTCCTAC CCAAGGGGAG TTACGCCACC TCGGTTCTGC GGGAGATAAC CAAGAACTTC
TGA
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| Protein sequence | MSEQRYLTAH LPGCGGVIKQ SPDDFIVTEI PAYEPCGSGE HLYLTIEKRG LTTLEAIRLI
ARSLSLPERE IGYAGMKDSV GVTRQTISVP RIRPEEVAGL SLKGVQLISA LRHTNKLKLG
HLKGNRFNLV VRSVNEGALA AASAILKVLV ERGVPNRFGY QRYGVQGNSH LIGAAMLRGD
WKGAVDLLMG DPQLLRDDQW RSAIQAYQRG DVAEALRLLP RHCDCERSVL QRLVSRPGAW
EKAFGAVHPR LRKLYLSAYQ SSLFDRVVEE RLDRIDRVME GDLAWKHVNG ACFLVEDQEQ
EQPRAERFEI SPSGPMFGTK MMQPQGEPRN MEERILAEEG LTLDSFGAQS GVAMEGQRRA
LRVPLGNPSC SQEGSSLCLE FFLPKGSYAT SVLREITKNF
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