| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1472 |
|---|
| Symbol | |
|---|
| ID | 4572304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1573382 |
|---|
| End bp | 1575433 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639755517 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_901146 |
|---|
| Protein GI | 118579896 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.907424 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAC AGAAGAGACG TTTTTCCGTC AGAATCAAGA AACGGGGTCT GCTGGCACCG
GTGCTGGCGG TTTCCCTGCT GTCGACACCA GCCATGGCCG ATGACCAGGC GCCGAAGAGT
GACGAAAGCG GCGATGTCTT CACCCTGGGC AACGTGGAGG TTACCGGCAA GGGCGAGAGC
ATCAAGAACC CGGCCGTGGA GGTGGTCACC AGCGAGGATA TGCTCCAGTT CGACACCAAG
ACCGTGTCCG AAGCAGCCAA CCTGGTTCCC GGTGTCACCC TTGCCAAGAT GGGGGCGCGC
AACGAGTCCA CGGTCTACGT GCGCGGTTTC GACCTCAAAC ACGCGCCGCT GTTCATGGAC
GGCATCCCGA TCTACGTCCC CTATGACGGC AATGTGGACC TGGGGCGCTT CTTCACCTAC
GACCTGTCGG AGCTGGTCAT CTCCAAGGGG TTTGCGTCGG TGCTCTACGG TCCCAACACC
ATGGGGGGCG CCATCAACAT GGTCTCCAAG CGCCCCACCA AGGAGTTCGA GGGCAGTGCC
GGCACCGGTT ACAGCTCCGT GGACCAGTAC CACGCCTTCG CCAACTTCGG AACCAACCAG
GGAAAATGGT ACTTCCAGGG AGGCGGCTCC TGGTTCGACA CCAACGGCTT CGAGATGTCG
GAGCACTACC ACAACACAAC CTACGAGAAC GGCGGCAAGC GCAACAACGC CTATGCCCAG
GACTGGAAGG TCAGCGGTAA GCTGGGGTTG ACCCCCAACA GCACCGACGA GTACGCCCTG
AGCTATATCT ACCAGAACGG CGAAAAGGGG GTGCCTCCCT ACGCCGGCGA CAATCTCACA
AACCAGAAAA AGAAGTTCTG GCAGTGGCCC TACTGGAGAA AGCAGAGCCT GTACTTCACC
TCCAATACTG CCATCGGCGA GAAGAGTTAT GTGAAGACCC GCGCCTATTA TGATCGCTTC
AAAAACTCGC TTTTGATCTT CACCAATGAC AGCTACAGCA CCGTCACGCC CAACAGCGGC
AACAGGAGCT GGTACGACGA CTACACCTAT GGCGCGTCCA TCGAGGCTGG CACCAAACTG
ATCTCCAACA ACGAAATCAA GCTGGCCTTT CTTTTCAAGG ACGATGTCCA TCGTGAGGAC
GATGATGCCA CCGGTTCCCC ACAGAAACGT TTTGAGGAGC GCATCTTCAC CATCGCCCTG
GAGGACACGA TCAAGCTGAC CGACAAGCTC TCCGCCATAC TGGGGGTCAG CTACGACTTC
CAGAATACGG TCCAGGCCCA GGACTACAAT CCGATCGTCT CCGGCGGCCC CAATGTGCTG
CACGATTTCG ACCGTAAAAA CAATAGCGAC GTCAATGCCC AGGCAGCGCT GTTCTATGCC
TACTCCGACA CCGGCAAGGT GCATGCCGCC GTGGCGCGCA AGAATCGTTA CCCTTCCATC
AAGGATAAAT ACTCCTACCG GTTCAAGACC TATGTGCCAA ACGAAAATCT GGATCCTGAA
GTGTCCAATA ACTATGAAAT CGGTGTCGAG GATACATTTG CCAAAAATAT TAGAGTCAAA
AGCACCCTGT TTTTTAACGA CATATCGAAA TATATCCTGG AAGTTAAAAA CGTGGAGGGA
ACCAAGTCGC AGCTTCAGAA CGTTGGCCAC GTCCAGCGCT ACGGCTACGA ACTCGAGGCG
AACGCCGCTA TTACCGAGAG CCTGGAAGCC GGTATGAACT ATACCTTCAT GTACAACAAG
AACAGGACCA GCGATCTGGT AATAACCGAT CTTCCCAAGC ACAAGTTCTT CGCCTACGGC
ACGTACTCCC CCATCAAGCA ACTCAAGCTG TTCGCCTCAC TGGAGTACGA CACCAGGCGC
TACAGTTCGT CCGACGGGGT GGATGAGGCG GGTGAGTTTG TGGTCATCAA CACCAAGGCG
AGTTACGAGG CGATCAAGGA CCTCGTGCTG GAGGCGGGGA TCAACAACCT CCTGGACCGG
GATTATGAGT TGACCGAGGG CTATCCCGAG GCGGGCCGCA CCTATTTCGT CCAGGCGCGC
TACAAGTGGT GA
|
|---|
| Protein sequence | MKKQKRRFSV RIKKRGLLAP VLAVSLLSTP AMADDQAPKS DESGDVFTLG NVEVTGKGES
IKNPAVEVVT SEDMLQFDTK TVSEAANLVP GVTLAKMGAR NESTVYVRGF DLKHAPLFMD
GIPIYVPYDG NVDLGRFFTY DLSELVISKG FASVLYGPNT MGGAINMVSK RPTKEFEGSA
GTGYSSVDQY HAFANFGTNQ GKWYFQGGGS WFDTNGFEMS EHYHNTTYEN GGKRNNAYAQ
DWKVSGKLGL TPNSTDEYAL SYIYQNGEKG VPPYAGDNLT NQKKKFWQWP YWRKQSLYFT
SNTAIGEKSY VKTRAYYDRF KNSLLIFTND SYSTVTPNSG NRSWYDDYTY GASIEAGTKL
ISNNEIKLAF LFKDDVHRED DDATGSPQKR FEERIFTIAL EDTIKLTDKL SAILGVSYDF
QNTVQAQDYN PIVSGGPNVL HDFDRKNNSD VNAQAALFYA YSDTGKVHAA VARKNRYPSI
KDKYSYRFKT YVPNENLDPE VSNNYEIGVE DTFAKNIRVK STLFFNDISK YILEVKNVEG
TKSQLQNVGH VQRYGYELEA NAAITESLEA GMNYTFMYNK NRTSDLVITD LPKHKFFAYG
TYSPIKQLKL FASLEYDTRR YSSSDGVDEA GEFVVINTKA SYEAIKDLVL EAGINNLLDR
DYELTEGYPE AGRTYFVQAR YKW
|
|---|
| |