| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1237 |
|---|
| Symbol | |
|---|
| ID | 4574123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1294528 |
|---|
| End bp | 1296738 |
|---|
| Gene Length | 2211 bp |
|---|
| Protein Length | 736 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639755277 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_900916 |
|---|
| Protein GI | 118579666 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCAGG AAAATTTCAT ACGCGCGATT GCCTGCGGTG TGGCGCTGGC GGTTGCGCCG
TCTGTCGCAA CGGCCCAGGA ACGGGAAACG GAACAGATGG ATACGGTCAT CGTGACCGCC
ACCAGAACCG AAAAGGAGTT GGACTCCGCG CCCGGCAGCG CGTCCGTGGT CACGAAGCAG
GAAATCGAAA AAAAAGAAGT CCTTACCTTT GACGACGCCT TGAAGGGAAC GTCCGGTGTC
ATGCTTTCGC GTTCAAAAGG CCCCATGGAT ACGATAGCGA ACATTACCCT GCGCGGCGTT
CCCGGACAGA ACAGGACGCT GATCATGGTG GACGGCATCA CCCTGAACAG CCCCTTCGCC
GGATCGATCC AGTCAAACAG CATTGCCCCC GGCACCATCG AGAGGATCGA GATTGTCAAG
GGGGCAACCT CCAGCCTCTA CGGCGGCAAC GCCATGGGCG GCGTCGTCAA TGTGATCACC
AAAATGCCGA CCAAGCGCGA GTTCACCCTC AAGACCGGCT TCGGTTCCGC CCTGGAGGGG
GATGCTCCGG AAAACACCCG GCGTGTGGCG GTCTCCTACG GTGATGTGAT TAAAGACAAA
TTCCATATCT ACCTTTACAA CGATTACACC GGAACGGACG GTTACGTAAC CGATCTGGTG
ACCGGCACTC CCGGCAGCGG CACCAGCGGG GCGCGACCGA CGCTGACCAG TGACGAAAAG
GCTACCTTTC TGCTGGGCCA CAAGGGCGAG AACGAGGCCT GGCAGGACAA TCTTACCGTC
AAGGCCGGGT ATGATTTCAA TTCCAGCACG AAACTGCTCT TCACCTTCCT CAAGTCCTAT
GGCGAATACT CCTACAACGA TCCCGAGACC TATATGACCG ACTCCTCGGG AAACCCTTAC
TGGAGCTCTT CCGGCTCGGA GTACTCCTTC CTGGGGACCT ACGGCGCCAA CAACCAAAAC
ATCTACGCTC TTTCCCTGGA AACGGAGATA GCCTCCGCCA AGATCAAGGC CGGGATCAGC
TACCTGGATC AGGATACCAG CTGGTATGCC ACCGCCAGCA GCACGACCAA ATCCCCGGTA
GCCACCCGCT CCGACGGTCC GGGCAAACTC ACCAGCACCC CCGCCTCGGC CCTGAGCGCT
GACGTGCAGG TAACCTTCCC GCTCCTATCC TGGAACATCT TCACCGTCGG AGGCGCCTTC
CGCCAGTCGG AGATCAACGG CAAGGACTAT GTGCTTTCCG ACTGGACGAA TGAGCACAGC
AAGGGGCAGC TTATCGGGGA AGCCAGGGGA ACGGACAGGA TCTATGCGCT GTTCATGCAG
GACGAAATTT CAATCCTGGA TAACCTGACG CTCTACGCCG GATTCCGCCA GGACTGGTGG
GAAACCAGCG ACGGCCATGT CCTGGCCTCC AACGCGTCCA ACGTCGTCAC GGTCGGTCCC
ACGTCATTCG GCTCCCGCAG CGAAAGCGCA TTCAGCCCCA AGGGGGCCAT CGTCTACACG
CCCTTTGCGG GCACCACCCT GAAGGTCTCC GGCGGCAAGG CTTTCCGCGC TCCCAGCAAC
TACGAACTCT ACCGCACCAC CATGATGGGA AGCTCCACCA CCTACCAGTG CAACCCGGAC
TTAAAGCCGG AGCGAAGCGT CAGCTGGGAC GGCGGCGTAA GCCAGGATCT GTGGCAAGGC
GCAACGGTCA AGGCCACCTA TTTTGAGAAC TACATCAAGG ACATGATCTA CAGCACCACC
ACCGGCAGCA TCCGGGAAAA GAAAAACGCC GGCAGAGGCG AAAGCAAGGG GGTGGAGGTG
GAGCTGGAAC AGAAATTCGG AAAACTGCTG CGCCTGTTCG CCAACTACAC CTACACCAAC
GCCAAGATAA CCAAGAACAG CGCCGTCCCG GCCACGGAGG GAAAACGCAT GACCGATATC
CCCCGCACCA TGTACAACGC CGGCGCCGAC CTGGAGTATG GGCCCGCAGG CGCGTCGGTC
ATCGCCCGCT ACGTGGGAAA ACGGTACGGC AACGACACCA ACAACGACAC TGCCAGGAAT
GTGAAGGGGG TCTACGACTC CTACATCACC ACGGACGTCA AACTGCGCTA CAAACTGACG
TCCTGGGCAA CGGCATCCTT TTCGGTCAAC AACATCTTCG ATGAGAAATA CTTCTCATCC
ACAAAATCTC CGGGGCGATC ATGTTACGGC GAAGTGACGT TACAGTACTG A
|
|---|
| Protein sequence | MQQENFIRAI ACGVALAVAP SVATAQERET EQMDTVIVTA TRTEKELDSA PGSASVVTKQ
EIEKKEVLTF DDALKGTSGV MLSRSKGPMD TIANITLRGV PGQNRTLIMV DGITLNSPFA
GSIQSNSIAP GTIERIEIVK GATSSLYGGN AMGGVVNVIT KMPTKREFTL KTGFGSALEG
DAPENTRRVA VSYGDVIKDK FHIYLYNDYT GTDGYVTDLV TGTPGSGTSG ARPTLTSDEK
ATFLLGHKGE NEAWQDNLTV KAGYDFNSST KLLFTFLKSY GEYSYNDPET YMTDSSGNPY
WSSSGSEYSF LGTYGANNQN IYALSLETEI ASAKIKAGIS YLDQDTSWYA TASSTTKSPV
ATRSDGPGKL TSTPASALSA DVQVTFPLLS WNIFTVGGAF RQSEINGKDY VLSDWTNEHS
KGQLIGEARG TDRIYALFMQ DEISILDNLT LYAGFRQDWW ETSDGHVLAS NASNVVTVGP
TSFGSRSESA FSPKGAIVYT PFAGTTLKVS GGKAFRAPSN YELYRTTMMG SSTTYQCNPD
LKPERSVSWD GGVSQDLWQG ATVKATYFEN YIKDMIYSTT TGSIREKKNA GRGESKGVEV
ELEQKFGKLL RLFANYTYTN AKITKNSAVP ATEGKRMTDI PRTMYNAGAD LEYGPAGASV
IARYVGKRYG NDTNNDTARN VKGVYDSYIT TDVKLRYKLT SWATASFSVN NIFDEKYFSS
TKSPGRSCYG EVTLQY
|
|---|
| |