Gene Ppro_1004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1004 
Symbol 
ID4574796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp1055283 
End bp1055660 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content51% 
IMG OID639755044 
Producthistidine triad (HIT) protein 
Protein accessionYP_900689 
Protein GI118579439 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCCTT GTCCCTTCTG TAATATTGAC CATTCCCGTA TCATGATAGC CAACGACCAT 
GCCTTGGCCA TTATGGACGG CTTTCCTCTG TCGCCCGGCC ATGCTCTTGT CATACCCAGG
CGACATATTG CATCGCTGTT TGAGGCGACT AAGGATGAGC GAGAGGCATT ACTTGATCTG
TTGGAACAGA CAAGAACGGA GCTGATTGGA CAGTACAACC CCGATGGCTT CAACATCGGT
ATCAACGATG GCGCATATGC CGGACAGACC GTTATGCACC TGCACATTCA CCTGATTCCC
CGTTACAAAG GAGATCAACA GGACCCACGT GGTGGTGTGC GCTGGATTTT TCCTAACAAG
GCGGTGTATT GGAAATAG
 
Protein sequence
MAPCPFCNID HSRIMIANDH ALAIMDGFPL SPGHALVIPR RHIASLFEAT KDEREALLDL 
LEQTRTELIG QYNPDGFNIG INDGAYAGQT VMHLHIHLIP RYKGDQQDPR GGVRWIFPNK
AVYWK