| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0987 |
|---|
| Symbol | |
|---|
| ID | 4573209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 1028978 |
|---|
| End bp | 1033987 |
|---|
| Gene Length | 5010 bp |
|---|
| Protein Length | 1669 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639755027 |
|---|
| Product | Tfp pilus assembly protein tip-associated adhesin PilY1-like protein |
|---|
| Protein accession | YP_900672 |
|---|
| Protein GI | 118579422 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3419] Tfp pilus assembly protein, tip-associated adhesin PilY1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGGT TATTTCTGCA GGTTGCCCTG CTGACGTTTC TGCTGTGCAT TGGACTGCGC
ATCACCAGTG CAGAAGCCTA TTACGTGTCA TCGACTACTC CCGCGGACGA CCCTTCCTAT
CTCGCGCCGG TTGCAGTGGA TACGGTGATA GAGTTCGTTT TTTCCAGTGA CGTTTACTGG
AGCCAAATCT ATAACAATAA TAAACTGCGC ATAACTCTGC GTCAGAAGAA TACGACGGCG
AACCTGCTCA GCCCCTCGGA TTTTAAACGC TGGTCATCGT TTCTGGGCAG CTGGGTTGAT
CCCGATTTTG GGTTCAAATA CGGAGTTAAG TACCGAGCAT ACCCATCGGC TAATCTGTTG
CCTGATACGG AATACGAACT GGTCTTTTCA AAGAACATAA AGGATGCCGC TGGCAATACG
CTTGGTACAT CAGATACCAT TATTCATTTC AAGACAGCCG CTGCCACTCC ACCCGCAGCA
ACCATCATCG ACAACGATCC CACCAATGGC GCCACCAACA TTGCCCTGAA TCTTTCGGAG
ATCACGGTCC GCTTCAACCA GCAAGTTGAC TCAACAGAGG GAGGAAGCAC TTCCATACTC
AATTCGTCCA ACTTCTCCGT TTCCCCTGCG GTGAGCGGTA CCTATTCCTA CGACTCCGGC
GCGGCCCAGG GTAAGCTGAC TCTATCTTCG GCACTTTCCG CCAGCACCAC CTACACGGTG
ACGGTCAATA ACGTGAAAGA TGCCAACGGT CAGACGGTTG TCGGTCAGCC CTACACCTGG
ACATTTACCA CCCGCTCCAG TGACACCACC AGGCCGACCG CCAGCGTGGT TACCCCCACG
GCTACAACCT CCATTCCCGT CAGTCAGGAT TTCATCATCC AGTTCAGCGA GGCCATGGAC
CCGGCCAGCA TCACCGCTGC TAATCTATAT ATTTCTGGCG TGACCGGTAC GGTCACGTAC
GACAGCATCA ACAACAGGGC CACCCTGACG ACCAGTTCTT CTCTCGGTTA TGGTACGGAC
TACACCCTGA CCGTTTCCAC TTCCGTCAGG GACCTGTCCC TGAACACCAT GCTCAACCCA
CTGACATTTG CGTTCACAAC TGTGCAGTTC ACGACACCGG CGGCCATGAA CGATTACTGC
CAGATTCCCC CCTTCATCTC CGGTGGATCG GTCAAGCCGA ACGTACTGCT CATGGTGGAC
AATTCCGGCA GCATGAACGA GTTCGCCTAC AAGAATAAGG GGTACGGCGA CAGCAACTAC
GACACCAGCT ATGACAGCTC CAAGAGCTAC TACGGCTATT TTGACACAGC CTACATGTAC
CAGTACGATA CCTCCGCCAG TGGCCACTTC AAGATCGATA CGTCCAAGAC CATGAACAGG
GAAAGCTTCT GGTCCGGCAA CTTCCTGAAC TGGCTGACCA TGCGCCGGGT GGATGTGGTC
CGCAAGGTGC TGGTTGGGGG CAAGATCACT CCCCGCTCCC TTGCCAATGC CAACTACGCC
CTGATTCATG ACGGTCCCGA CCGGGATTAC TACAAGCGGT ATGGCAACAA TTACTACATT
GTCGACGACG GCAAAATCTA CTCCTGCGGC ACCACTGCTA ACTGTTCAAA AAAGGATGCA
ACTACCTACA ACGGTAAGGT TTACGTGGGC GAAAACCCTC CGGAGGAGGG GCTTGTCGTC
AAGATGTGGG ACAAGATCAA CTTCGGGATC ATGTTCTTTA ATGTCGGTAA CAGGCTCGAG
GACAGCCAGA ATAGCGTCCG CGACGGCGGC TATCCGGCGG TGGATCTGGG CTCCACCGGA
ACCAACTTGA TAACCCAGGT GGAGAATACC GATCCGGAAA CCTGGACCCC TCTAGGAGAG
ACCTTCTTCG AGGCGACCCG CTACTTCATG GCTACCGACA GCGCCTACAA CGGTGGCACC
TACAGCGGCA AAGACCCCAT CGAGCACAGT TGTCAGAAGA ACTTCGTCCT GATCCTGACC
GACGGCGAAG CGACCAAAGA CCGGAACCTG CCGGGCGGCA ACTGGGGAAC ACCCATCACC
GATTCGCATT TCAACGTGAA GACCTGGATG GACAAGATTG CCGATAACGA AGGTTCTACC
AGCCAGTGGA ACGTGTCGCC CAATACTAGC GAGGGATCGT ACTACCTGGA AGGGGCTGCC
TACTGGGCGC ACATGACCGA CCTGCGCAGC GATACTCTGG GAAAGAGCAA CATAAGCTCG
AATCAGAACA TCACCACCTA TGCCGTGTAC GCCTTCGATG ATTCTAACCT GGGGCGCGAC
CTGCTGCAGA AGACCTGCAA GTATGGCGGC TTCGATGACT CGGACGGAAC CGGCAAGCCG
GACCAGCAGT CCAAGTGGGA CAGTGACGCT AACGGCGTGC CGGACACATA CTACGAAGCC
CAAGATGGCA GCAAGCTGGA AGGGGAATTG CTGGCCGCTC TGCTGGATAT CCTGACCCGC
GTTTCATCGG GAACGGCAGC ATCCATCCTC AACAACAGCG AGGGGAGCGG CGCCAGCCTT
CTGCAGGCGG TCTTCTACCC CAAAAAGGCT TTTGAGAGCG GCACCGAGGT GAGCTGGATC
GGCGAGATGC AGAATCTGTG GTACTACCTC GATCCCTATC TGCAGCTCAG CACGATCCGC
GTGGATACGG AAAGCGACTA CAAGCTGAAC CTGAAGGATG ACAATATCGC CCAGTTCTAT
TTCGACGGTG ACAAGACCCG GGTCAGGTTG CTGAAGGATG TCAAGGGGGA CGGAACACAG
CTGACCCTTG TTGGTGCATC CTACGACCCC GACGACACCA CCAATGTCAA GAGCCTGTGG
CGGGCCGGTC GCTTGCTCTG GAGCCGTGAC CTGGTCAGCG ACAACCGCAC CATATTCACC
CACACCGGCG TATCGACTCT CGATGTGCTG GAGAATACAG CGAACGAGAG TACGCACCTG
GCTAACTTCG CGAGCAGCGT GCTCAAGGAC GACACCACGA TTCAGGGGTA CCTCCAGGCG
GCCAATGCCA CAGAGGCGGA CAAGATCATC TCCTATGTGC GTGGCATCGA CCAGTCAGGC
TACCGTTCCC GCACCGCCAT AATCGCCGGC GCCAGCGGTA CCTGGCGCTT GGGTGATATT
GTTAGTTCAA CTCCCAAGAT TCAGGGTAAC GTGGCGCTGA ACGCCTACTC TCAGAGTACT
CCCACCGGCT ATAACGACTC CTCCTATAAG AAATTTGCCC AGTCAAACGA CTATAAAAAC
CGGGGCATGG CTTATGTCGG CGCCAATGAC GGCATGCTGC ACACGTTCCG CATGGGGGTG
CTCAAGGAGT TGACCGATCC CTGCCGCGTG ACGTCACCTT CCGCCGACTG CGCGGCGGAC
AAGTCACAGC TGAACGACTA TACCGTTGAC AGCAGCGGGG CGAACAGTAA CACCAGGGCC
GATGCCTCCG ACAAATTGGG GCGGGAGGAG TGGACCTTTA TTCCCCGCCA AATGCTCCCT
TATCTCAAGT ACCTTGCCGA TCCCGATTAT TCGCATCTGT TCTACGTGGA TGGCGCGCAG
CTCATCGTCG ATGTGGCCAC CAACAAGCCG GCAACCTATG ATACATCCAA GTACCCCAAC
TGTGGCACGA ACTATTGGGA GTGTCCCAAA CAGACTGTCT TCAGCAATGA CGTTTCCGGG
GACACGACAA ATAATTTGGA CACATCCAAT ACCAGCTGGC GGACTGTTCT GATCGGCGGC
ACCGGTCTGG GCGGCGCGAG CAGAAACCGC GGCGGCACCG GTCTCTGCAC CGGCGGCGGC
AGCGACTGTG TGAAAACGCC GGTGGCCGAT CTGGGATATT CCGGTTATTA CGCGCTGGAT
ATCACCAATC CCCAAGCGCC GAAGTATCTC TGGGAGTTTC CCGGCAATAC GACCGCTGTG
GGGAACCTGG GATTCGCCAC GACCGGGCCG GTGATCATCC GTGTCGGTGA CAAGAACCAA
AACGGACGAT GGTTCGCGGT CTTTGCCTCG GGGCCGACCG GGCCGATAGA AACAATTACC
CATCAGTTCC TGGGGCGCTC CGATCAGAAC CTGAAACTGT TTGTCGTGGA TATCGCGACC
GGGGCGCTTG TCAGGACGAT TGACACGGGA ATTACCAACG CGTTCGCCGG TTCCGTCTCC
AACTCGGCCA TTGACAATGA TCGCAACAGC AGCACCAAGT CCGGATTCTA TCAGGATGAT
GCCGCCTACA TCGGCTATGT TCAGAAGGTC GATGCCAGCA ATTGGACGAG AGGCGGTGTG
ATCAGACTGG TTACCAGGGA GAGCGTGGAT CCCAGCACAT GGTCCACCAG CACGGTTATT
GCTGATGATC CTACCAGTAG CACCATCAAT ATCGGGCCTG TTACCACCGC CATAACTAAA
CTGCAGGACA GAGTCAACAA GAAACAGTGG CTGTACTTCG GAAGCGGCCG CTACTTTTTT
AAGAATGCCA CCCAGGTGGA TGACGGTGAC ACTCAGCGCA GGCTGTTCGG AGTTACGGAA
CCCTGGTATA ACGGTACGAC GCAGAAGATC GATCCGACCA TGACCGGTAG CCTCTCATTT
TCCGATCTCG ATGATCAGAC TACATCGCCG AGTTCGGCTC TCGCCTCGGG CAAGAAGGGG
TGGTACATCA ATCTCGATAC ATCGGCACTT AACGACGGCT ACTCATCCGA GAGGGTCATA
ACCGACCCGG TCGCATCTAC AAGCGGGGTT GTTTACTTTA CGACATTCCG TCCCACCTCC
GATGTGTGCG GCTATGGCGG GGGTTCCTAC ATCTGGGCGG TGGGATATGC CACGGGAACT
TCAGCGCCGG GCAATGCCAT GAAGGGGAAG CTGCTGGTTC AGGTTTCCAC CGGCGCCTTT
GCGGAAATCT CCATGTCATC CGGTTTTACG GCAAAGGACA ATCGCCGGAC TACCGACATG
ATCCAGGGGG TTCCCCCCAA GGCCCAGGGA CTCTCGATTC TGGCTAACCC CAAGCCGATT
AAGAAGATCA TTCACTATCA GGAAAAGTAG
|
|---|
| Protein sequence | MRRLFLQVAL LTFLLCIGLR ITSAEAYYVS STTPADDPSY LAPVAVDTVI EFVFSSDVYW
SQIYNNNKLR ITLRQKNTTA NLLSPSDFKR WSSFLGSWVD PDFGFKYGVK YRAYPSANLL
PDTEYELVFS KNIKDAAGNT LGTSDTIIHF KTAAATPPAA TIIDNDPTNG ATNIALNLSE
ITVRFNQQVD STEGGSTSIL NSSNFSVSPA VSGTYSYDSG AAQGKLTLSS ALSASTTYTV
TVNNVKDANG QTVVGQPYTW TFTTRSSDTT RPTASVVTPT ATTSIPVSQD FIIQFSEAMD
PASITAANLY ISGVTGTVTY DSINNRATLT TSSSLGYGTD YTLTVSTSVR DLSLNTMLNP
LTFAFTTVQF TTPAAMNDYC QIPPFISGGS VKPNVLLMVD NSGSMNEFAY KNKGYGDSNY
DTSYDSSKSY YGYFDTAYMY QYDTSASGHF KIDTSKTMNR ESFWSGNFLN WLTMRRVDVV
RKVLVGGKIT PRSLANANYA LIHDGPDRDY YKRYGNNYYI VDDGKIYSCG TTANCSKKDA
TTYNGKVYVG ENPPEEGLVV KMWDKINFGI MFFNVGNRLE DSQNSVRDGG YPAVDLGSTG
TNLITQVENT DPETWTPLGE TFFEATRYFM ATDSAYNGGT YSGKDPIEHS CQKNFVLILT
DGEATKDRNL PGGNWGTPIT DSHFNVKTWM DKIADNEGST SQWNVSPNTS EGSYYLEGAA
YWAHMTDLRS DTLGKSNISS NQNITTYAVY AFDDSNLGRD LLQKTCKYGG FDDSDGTGKP
DQQSKWDSDA NGVPDTYYEA QDGSKLEGEL LAALLDILTR VSSGTAASIL NNSEGSGASL
LQAVFYPKKA FESGTEVSWI GEMQNLWYYL DPYLQLSTIR VDTESDYKLN LKDDNIAQFY
FDGDKTRVRL LKDVKGDGTQ LTLVGASYDP DDTTNVKSLW RAGRLLWSRD LVSDNRTIFT
HTGVSTLDVL ENTANESTHL ANFASSVLKD DTTIQGYLQA ANATEADKII SYVRGIDQSG
YRSRTAIIAG ASGTWRLGDI VSSTPKIQGN VALNAYSQST PTGYNDSSYK KFAQSNDYKN
RGMAYVGAND GMLHTFRMGV LKELTDPCRV TSPSADCAAD KSQLNDYTVD SSGANSNTRA
DASDKLGREE WTFIPRQMLP YLKYLADPDY SHLFYVDGAQ LIVDVATNKP ATYDTSKYPN
CGTNYWECPK QTVFSNDVSG DTTNNLDTSN TSWRTVLIGG TGLGGASRNR GGTGLCTGGG
SDCVKTPVAD LGYSGYYALD ITNPQAPKYL WEFPGNTTAV GNLGFATTGP VIIRVGDKNQ
NGRWFAVFAS GPTGPIETIT HQFLGRSDQN LKLFVVDIAT GALVRTIDTG ITNAFAGSVS
NSAIDNDRNS STKSGFYQDD AAYIGYVQKV DASNWTRGGV IRLVTRESVD PSTWSTSTVI
ADDPTSSTIN IGPVTTAITK LQDRVNKKQW LYFGSGRYFF KNATQVDDGD TQRRLFGVTE
PWYNGTTQKI DPTMTGSLSF SDLDDQTTSP SSALASGKKG WYINLDTSAL NDGYSSERVI
TDPVASTSGV VYFTTFRPTS DVCGYGGGSY IWAVGYATGT SAPGNAMKGK LLVQVSTGAF
AEISMSSGFT AKDNRRTTDM IQGVPPKAQG LSILANPKPI KKIIHYQEK
|
|---|
| |