Gene Ppro_0924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0924 
Symbol 
ID4574649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp974912 
End bp975433 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content64% 
IMG OID639754966 
Productpolysaccharide deacetylase 
Protein accessionYP_900611 
Protein GI118579361 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0726] Predicted xylanase/chitin deacetylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGTTC TGTGCGCCGC CCTGTTGGCC GCCTGCGCCG GCAGCCGCCC GCCTGTCCCG 
GCAACGGGCC CCATGCCGCT GGTGACCTTC GTGCTGGACG ACGGCAACGA CACCGACTTT
CTGCTGGGCA GGAGGATCTT CGCCGAACAG GGGGCCGTTG CCTGCAGCGC CGTGACCACT
GACCTGATCA ACACCCCCTT TCACATGACT CCTGAGCAGA TCAGGGGGCT TGAGGAGGCC
GGATGGGAGA TCATGAGCCA CACCGTCTCC CACCCCCACC TGCCGTTTCT GTCCCCGGCC
GAGCTGGAGC ATGAGCTGTC GCGCTCCAAG GCGGTACTGG AAGGATTGGG GGTGAGGGTC
ACCAACATCG TCTACCCTTT CAACAGCAAC AACAGTGAGG TGAGGAGTGC GGCGGCCAGG
CACTACCGTT CCGGCAGGGG GGGGGGAGCG AGTTCAACGT CGGGAACATC GACCGCTCTT
TACTCACGTC ATTCTCCCTC AACCATGACC TGCCCCGGAT GA
 
Protein sequence
MLVLCAALLA ACAGSRPPVP ATGPMPLVTF VLDDGNDTDF LLGRRIFAEQ GAVACSAVTT 
DLINTPFHMT PEQIRGLEEA GWEIMSHTVS HPHLPFLSPA ELEHELSRSK AVLEGLGVRV
TNIVYPFNSN NSEVRSAAAR HYRSGRGGGA SSTSGTSTAL YSRHSPSTMT CPG