Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0913 |
Symbol | |
ID | 4574638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 964145 |
End bp | 966523 |
Gene Length | 2379 bp |
Protein Length | 792 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639754955 |
Product | exporter-like protein |
Protein accession | YP_900600 |
Protein GI | 118579350 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.231192 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGATT CCATCTTCTC CTGGCTGTAC GGCCGCGTCC TGCACCACAG GAGAGTGGTC ATCCTGCTGG TGCTGCTGCT CACCCTGGCC GCCGGAGCGG CGCTCTTTGT TGCCCGCTAC GAGGGGAACA TCGATCTGAT GCTGCCTCCG GACCCCGAGA TCGCCCGCAG CATGGACGTT CTCAGGGGAT CCAGCTTCTC GGACAAGATG GTCGTCTCCC TTGCCCTGAC CGATCCTTCC AAGACGAATA AGGAGCTCTT TCAGGCCGTG GACCAGCTGG CCTCGTCCCT GAAGCCGCCG CTGTTCATGA AAGTTGTGTC CGGCTTTTCA CTGGCCACTG CCATGGATGA ATTCTCCATC CTGCGCTATG CGCCCCAGGT GCTGGGGGAA GCTGATCTTG CGGTCATCGA CGGTCAGATC AGGGAGGATG TGGTGTCCCG CAAGCTGCGG GACATCTATC TGCAGTCCTT CAGGCCGGAG AGCATCTTCA CCTCGTCCCT CTCCCGCGGC GACCCCCTGG GGATCAAGCT GCTGCTGCTG GAAAAGATGC GGGCCCTGCC CGCCTCCATG GGGTACGACG TTTCCATCGA GGACGGGCAC TTCATCAGCC GTGACGGCCG TCACTCCATG CTGATCATCC AGACCTCGGT CCCCATGATG GACAGCCCGG GAAGCAAGCG GCTGGTGGCG GCCCTCCAGG AGCGGATCAG GGAACTGCCC CCCTATGTCA CAGCCGACAT CATCAGCGGC CATCTCCACA CGGTCAGCAA CGAACGGGTG ATCAAGCACG ACATCGCCGT CGTCTCCATC ATCGCCTCGG TAACCTTCCT GCTGCTCTTC CTGCTGCTCT TCCGCGACCC GCGGGTGCTG TTCGTGCTTA TCATCCCGCT CATCGCCGTT GTCTGGGCGA TCCCTTTGGC AACGGCCGTG GAGGGGCGGC TCTCGTTCAT CGTGATCGGT TTCGGCACGG CCATAGCCGG TATTTCCGAT TACGGCCTTG TGGTGTACAT CGCCATGAAA CGGGGCGTCG CCGTCGGCCA GATTGTCAAA CTCGCCAGGC TGGTCACCGT GGATGCGGCC ACCACCATGT TCAGCTTTCT GGTCCTGTAT ATTTCCGTGA TCCGCGGCTA CCATCAGCTG GCGCTCTTCT CCGGACTCTG CGTGGTGATC TGCCTGCTCC TGTCGCTGTT CCTCCTGCCG CCGCTCCTCT CCTGGAAGCG CTATCCCCTG GTTACGGACG CCACCATCGG TGACGGACTG GATCGGTTCC TCAAGCCGTG CCGGGCGAAT GTGGTGGCCT GGGCCGTGCT GACCGGTGTG GCGCTCGTGC TCTCCTTTTC GGTGACCTTC GACAGCGACG TGAAGAAGCT GGATGGCTCC GAACCGGGGA TCCTGGCGGC TGAACAGCGC TTCCATGATG TGTGGGGGGG CAAGGCCAAC CAGGCCCTGT TCGTGGTCAG CGCCGCCAGC CTGGAACAGG CCATGGAGAT CAACGACCGG GTCTACGGGG AGGTGGCCGG AACCCGGCTC AAGGGGGAGT TCACCAGCCT GGCACAGTTC TGGCCTTCCG CGAAAGTGCG CCAGGAGAAC GTCCGGCGCT GGGAGGAATT CTGGTCCCAG GGGCGGGAGC AGAAGCTTCA AGAGCTGATC CGCCGGACGT CTGTATCCCA GGGCTTTTCC GAGAACGCCT TTGAACCCTT CTTCCAGGGA CTGCATGCCT CACCCGGGGG GGAGGCGGTG ACGGGCGGGG TGATCGGACA GCTGCAGGAT CGATTTGTGT TGAGCAAAAA CGGAGAATAC CGTATCGTAT CCTACTTTCC CGACCAGCGG GATTACATCG ATGCGCTGAA ACCGATCACG CAACGATACC CTGGCACGTT TGTCGTATCG GGGAGAGCGC TGTCAGAGTC CATATCCACC ATTACCGGTC GTGAGATCAG GATCCTGGCG CCGCTGGCCA TCCTGCTCAA CGTCCTCTTG ACCTGGCTGC TCTTCAGGGA GTGGAGATAC ACCCTGATCG CCCTGGTGCC GCTGGTTACC GGCATTGTCT GGCTGACCGG CATCATGGCG CTCCTGCACA TTCCGCTGAA TGTCATCAAC ATCGTGGCCG CCATCGTCTC CACCGGCGTG GTCGTGGACT ACGGAAACGG CATGGCCTAT GAGCATCGCC ACAACCTGAA CAGCGGAGCG CACCTGGCCG TGACCATGTC GGCGGCAACC AACGTCATCG GCTGCGGGGT GCTGCTGTTC GCCAGACACC CGGCGCTGTT CTCCACCGGC GTTGCCATGG CGATCAGCAT GGTCAGCGGC TATCTCACCG CGCTGCTGGT GGTTCCCTCA CTCTGCGCCA TGGCGCGGGA GCGGGGAGGG GAGCCGTGA
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Protein sequence | MFDSIFSWLY GRVLHHRRVV ILLVLLLTLA AGAALFVARY EGNIDLMLPP DPEIARSMDV LRGSSFSDKM VVSLALTDPS KTNKELFQAV DQLASSLKPP LFMKVVSGFS LATAMDEFSI LRYAPQVLGE ADLAVIDGQI REDVVSRKLR DIYLQSFRPE SIFTSSLSRG DPLGIKLLLL EKMRALPASM GYDVSIEDGH FISRDGRHSM LIIQTSVPMM DSPGSKRLVA ALQERIRELP PYVTADIISG HLHTVSNERV IKHDIAVVSI IASVTFLLLF LLLFRDPRVL FVLIIPLIAV VWAIPLATAV EGRLSFIVIG FGTAIAGISD YGLVVYIAMK RGVAVGQIVK LARLVTVDAA TTMFSFLVLY ISVIRGYHQL ALFSGLCVVI CLLLSLFLLP PLLSWKRYPL VTDATIGDGL DRFLKPCRAN VVAWAVLTGV ALVLSFSVTF DSDVKKLDGS EPGILAAEQR FHDVWGGKAN QALFVVSAAS LEQAMEINDR VYGEVAGTRL KGEFTSLAQF WPSAKVRQEN VRRWEEFWSQ GREQKLQELI RRTSVSQGFS ENAFEPFFQG LHASPGGEAV TGGVIGQLQD RFVLSKNGEY RIVSYFPDQR DYIDALKPIT QRYPGTFVVS GRALSESIST ITGREIRILA PLAILLNVLL TWLLFREWRY TLIALVPLVT GIVWLTGIMA LLHIPLNVIN IVAAIVSTGV VVDYGNGMAY EHRHNLNSGA HLAVTMSAAT NVIGCGVLLF ARHPALFSTG VAMAISMVSG YLTALLVVPS LCAMARERGG EP
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