| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0858 |
|---|
| Symbol | |
|---|
| ID | 4572094 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 901507 |
|---|
| End bp | 901773 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639754900 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_900545 |
|---|
| Protein GI | 118579295 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0911009 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAC GTTTGAGAGA ATTGATCGCC ATCGGCGCCT CGGTAAGCGC CCACTGCCAA
CCCTGCCTCA GCCATCACCT GGAGAAAGCC CGCGAACTGG GCATTTCAGA CGAGGAGATC
CTGGCGGCGA TTGAAACAGG CCAGATGGTC AGCAGGGGGG CCATGAACGC CATGGGCACG
TTTTCAGCCT CGCTCGTGAA ACCGGCTGCA GCGGCATGCC GGTGTGGCTC TTCCCCCAGT
TCGTCACCCA GCAGTTGCTG CGCATAA
|
|---|
| Protein sequence | MDERLRELIA IGASVSAHCQ PCLSHHLEKA RELGISDEEI LAAIETGQMV SRGAMNAMGT
FSASLVKPAA AACRCGSSPS SSPSSCCA
|
|---|
| |