Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0489 |
Symbol | |
ID | 4572913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 511084 |
End bp | 511569 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 639754526 |
Product | rare lipoprotein A |
Protein accession | YP_900178 |
Protein GI | 118578928 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0797] Lipoproteins |
TIGRFAM ID | [TIGR00413] rare lipoprotein A |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.498807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAGCC TACGTCATCT AAAAACCTTG GTTTTTCCAC TCTGTGCGTT CATGAGCCTG GCTCCGGCAG GCACCGCACG CGCCGAACAG GGGAGCAAGG GAGTGACCGC GCCCCGTTCC AATGATTCAT CGTCCCCCAT AACATCACTG TTGGAAGGAC TGGTTCACAA GGCCAGTCCG CTGCAACCGG TGATCGGCTT GGCCACCTAT TACGCCAAAC GCTTCGAGGG GCGCAGGACC TCATCAGGTC ACCGCTACCA CCCCGACCTG ATGACCGCCG CCCACCACAG CCTGCCACTG GGTACCGTTG TGCGCGTAGT CAACCCGGCC ACGAAACAGG AAGTTCACGT CACCGTCAAC GACCGTTGCG CACGCAAGTC GTTCCACTTC ATCGACCTCT CCCGGGCAGC CGCACAGAAG ATCGGTCTCT GGCGCAGGGG AAGCATGAAA GTAGTCATCA TCCCCCTGCT GGAAGAGCCG GTCTGA
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Protein sequence | MFSLRHLKTL VFPLCAFMSL APAGTARAEQ GSKGVTAPRS NDSSSPITSL LEGLVHKASP LQPVIGLATY YAKRFEGRRT SSGHRYHPDL MTAAHHSLPL GTVVRVVNPA TKQEVHVTVN DRCARKSFHF IDLSRAAAQK IGLWRRGSMK VVIIPLLEEP V
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