Gene Ppro_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0488 
Symbol 
ID4572912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp510328 
End bp511080 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content60% 
IMG OID639754525 
Producthistidine kinase 
Protein accessionYP_900177 
Protein GI118578927 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAATC CGGCCGATAC GTATGGCCAG GGGAGACTCG ACGAAGAGCT CCTGAAGCAG 
CTGGTCCATA ATGAAAAGAT GGCCGAACTG GGCAGGATGT CCGCGGGGAT CGTGCACGAA
CTGAATGCGC CGCTCTCGGT CATCGCCTCG GCGGCTCAGA TGATCCTGCG CGAGACGGAT
GTGCCGGAGT TCGTGCGCGA GATGGTCGGA CGCATCGGCG TCGAGGCTCA GCGTCTCTCC
CATCTGGCCA GGGGAATGCT CAGTCTGAGC TGTCGAGACT CGACCCTCCA GGAGGTGGAC
ATCAATCTCA CCATCCGCTT TGTCCTTGAT TTCATCTCCT ACGAGGCGGC CCGGCGCGCA
GTCCTGGTCG TGCCGAAACT GGATTTTCGT CTGCCGGTGA TCCTGTTGGA CGGCAACAAG
CTCAAGCAGA TCCTGCTCAA TCTCGTCATG AATGCGTTGC AGGCCATGGA AGATCAAGGG
GGGGTGTTGC GCGTGGAGAC CGGCTCTCCG TTGCCGGGCG AGGTCGACAT CGTCATCAAT
GACAATGGTC CGGGGATTCC CGCCGAGTCC CTGGAAAAGA TATTCCAGCC CGGTTTCACC
ACCAAGAAGG AAGGAGAGGG GACCGGCCTG GGGCTGTTCG TTACCAGGAT GTTGGTGGAA
CAATTGGGGG GGCGCATTGA GGTGGACAGC CGCATTAGCG AAGGGACCAC ATTCAGGGTG
ACACTGTCAA CGGGGGAGCG GAGCGAGGAT TGA
 
Protein sequence
MKNPADTYGQ GRLDEELLKQ LVHNEKMAEL GRMSAGIVHE LNAPLSVIAS AAQMILRETD 
VPEFVREMVG RIGVEAQRLS HLARGMLSLS CRDSTLQEVD INLTIRFVLD FISYEAARRA
VLVVPKLDFR LPVILLDGNK LKQILLNLVM NALQAMEDQG GVLRVETGSP LPGEVDIVIN
DNGPGIPAES LEKIFQPGFT TKKEGEGTGL GLFVTRMLVE QLGGRIEVDS RISEGTTFRV
TLSTGERSED