Gene Ppro_0476 details

Gene Information

• Locus tag: Ppro_0476
• ID: 4572900
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: -
• Start bp: 497618
• End bp: 498259
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 639754514
• Product: outer membrane chaperone Skp (OmpH)
• Protein accession: YP_900166
• Protein GI: 118578916
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2825] Outer membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0013663
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCACGAA TCATTACCAG AATCCTGTTT GCGCTCCTGA TTTGCGCCCT GCCCTCCCTG 
GGATCCGCAG CGGAACAGGC TCCCCAGGCC GCGGAGGCAA AGCCCGCGGC GCCGATCCCG 
ACTGAGGCAC CGACTCCGGC ACCGCTGCCT GCGGCAACCA CCGAGGCGCC CAAACCACAA 
CAGTTGCGCA TCGGCTACAT CGACATCGTC CGCATCAGCA CCGAGAGCAG TCTGGGCAAG 
GCATCCGCTG CCCAGGCCAA GCAGAAGCAG GGGAAACTCC AGGCCCAGAT CACGGAGAAA 
CGGAAGCAGC TCGACAGGCA GAAGAAGGCG CTGGAAACCC AGTTCGCCTC CTTAAGCCCT 
GCGCAACGCG ATGCCAAGGC CAAAGAGTTC CAGAAGAAGG TGGAGAGTTT TCAGAAATTC 
GGCATGAACG CCGAAAAAGA GATGCAGACC CTGCAGCAGG GGCTCGGCAA GTCGTTCAAC 
GAGGCGGTCC AGCAGGCTGC TACCGAGTAT GGCACGGCCA ACAGCCTGGC CCTGGTGATA 
CTCAAGCGCG AGATTCTCTA CCAGGCGGGC AGCGTCGAGA CCCGGGATGT GAGCGAGGGG 
GTCATCAAGC TGATGAATGA AAAATGGGTA AAGAAGAAAT AG 

 

Protein sequence

MPRIITRILF ALLICALPSL GSAAEQAPQA AEAKPAAPIP TEAPTPAPLP AATTEAPKPQ 
QLRIGYIDIV RISTESSLGK ASAAQAKQKQ GKLQAQITEK RKQLDRQKKA LETQFASLSP 
AQRDAKAKEF QKKVESFQKF GMNAEKEMQT LQQGLGKSFN EAVQQAATEY GTANSLALVI 
LKREILYQAG SVETRDVSEG VIKLMNEKWV KKK