| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0474 |
|---|
| Symbol | |
|---|
| ID | 4572898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 495518 |
|---|
| End bp | 496096 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639754512 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_900164 |
|---|
| Protein GI | 118578914 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.554508 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC GTAACCGCAT CGGCGACAAG ATCACCACCA TACGGGAATC ACTCGGCCTT
ACCCGGGAGC AACTGGCCGA ACGCTGTGAC TGCAGCGAGA CCGTTATTGC CGGACTGGAA
CAGGGCGAAC TGGCGCCATC GCTCACGCCG TTGATCAAGA TCACCCGGAC CCTGGGGGTG
CGCCTAGGCA CGCTCTTGGA CGACGACACC ATGCTCGGCC CGGTGGTCAC CCGCTCTGGC
GAGAACAACG GTATCTCGCG AGTCAAGTCC CTGGAAATCG CCAGCAACGC GGGCGCCCTT
GACTTCTTCT CCCTGGCCGC GAACAAGACT GCGCGTCACA TGGAGCCGTT CATCATCAAC
GTCAAGCCGG CCTGCAAGGG GGGCGCCCCA CTCTCCAGCC ATGAGGGGGA GGAGTTCATC
TACATACTGG ACGGCACGGT GGAAGTCGAG TACGGCAAGG ATCTGTACCA GCTGGAACCG
GGTGACAGCA TCTACTACGA CTCCATCGTC CCGCACCAGC TGCGCAGCCG CGGCAGCGAC
AGCGCACGCA TCCTGGCCGT CGTGTACGCG CCGTTCTAG
|
|---|
| Protein sequence | MTDRNRIGDK ITTIRESLGL TREQLAERCD CSETVIAGLE QGELAPSLTP LIKITRTLGV
RLGTLLDDDT MLGPVVTRSG ENNGISRVKS LEIASNAGAL DFFSLAANKT ARHMEPFIIN
VKPACKGGAP LSSHEGEEFI YILDGTVEVE YGKDLYQLEP GDSIYYDSIV PHQLRSRGSD
SARILAVVYA PF
|
|---|
| |