| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_0450 |
|---|
| Symbol | |
|---|
| ID | 4572978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 473326 |
|---|
| End bp | 473820 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639754488 |
|---|
| Product | ribonuclease Z |
|---|
| Protein accession | YP_900140 |
|---|
| Protein GI | 118578890 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0000909133 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTTTT GTTCGACTGC GGCCAGATCG CCCACTTGGC AAAACTGGGT AGTCAAGCCG
ATCCGGGCCG TCTTCATCAC CCACGCCCAC ATGGACCACA TCATGGGGGT CCCCACGCTG
GTGCGCCATC ACCATGCCTC GCCCCATCCC CTTGACCTGT ACGGCCCTGC CGGCATCGCG
GAACGTGTCG GCCACCTGTT GGCCGGTTTT GAGTGGAACC TGGCCGAGCC GACCTGGTTC
ACCCTGCGGG TCCACGAGGT ACTTCCCGAC CGTATCCTGC ATTTCAGCTT CCCTGGTCCG
GAAAGGTTTA GGCGCCATTT TGCTGGAGAA GAAGAGCGCC AGAGTCGGGA GATCTGGTCA
TGCCCCTACC TGACGGTGGC GGCGGAGATC CTGGATCACA AACTGCCGGT ACTGGTTTTC
AGGGTCGACG AACGACCGCA CTTCTCCATC GACGCTGCCA AACTGGAACA GCGGGGACTG
GTTGCCGGGG CGTGA
|
|---|
| Protein sequence | MPFCSTAARS PTWQNWVVKP IRAVFITHAH MDHIMGVPTL VRHHHASPHP LDLYGPAGIA
ERVGHLLAGF EWNLAEPTWF TLRVHEVLPD RILHFSFPGP ERFRRHFAGE EERQSREIWS
CPYLTVAAEI LDHKLPVLVF RVDERPHFSI DAAKLEQRGL VAGA
|
|---|
| |