Gene Ppro_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_0192 
Symbol 
ID4573408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp193122 
End bp193724 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content55% 
IMG OID639754231 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_899886 
Protein GI118578636 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCCCC TTACTGACCG ACAGCAAAAG GTTCTGGATT TCATCACCAG CTTTATTAAA 
ACCAATAGTT TCCCACCCAC TTGGCGGGAC ATTGCGGCGC ATCTGGGGAT TACCAGCACC
TTCGGAGTGA ATCGGCATCT TGATGCCCTG GAGAAGAAGG GGTGGATAAA GCGAGCGGGT
ACTTCACGGA GGATTGTATT GACCTCACAG GAGGTGCGGT CGATATCGCT GCCGATTGTC
GGAACGGTAC GGGCCGGGCA CCTTCAACCT GCTGTCGAGG ACATCCAAGG GTTCTTTGCC
GTGGATCAGG AACAGGTGAA GGGGGATGGC TGCTTTCTAT TGCGGGTCAA GGGTGACTCG
ATGATCGGCG CCGGGATCTT TGATGGGGAC CTGGCTTTGG TACGCCCCCA GCCAGTGGCT
GATAATCGTG ATACTGTGGT CGTCATGGTG GATGGCGAGG CGACCCTGAA ATGGTTCCAT
CGCGAGCAGA ATCGTATCCG CCTGCAACCG GCCAACCCAA ATATGGCTCC GATATTTGTT
GGTCCGGATA AAGACGTGTC GATCGTCGGC AAGGTAATTG GCATCTATCG ACAGTTGGAG
TAA
 
Protein sequence
MIPLTDRQQK VLDFITSFIK TNSFPPTWRD IAAHLGITST FGVNRHLDAL EKKGWIKRAG 
TSRRIVLTSQ EVRSISLPIV GTVRAGHLQP AVEDIQGFFA VDQEQVKGDG CFLLRVKGDS
MIGAGIFDGD LALVRPQPVA DNRDTVVVMV DGEATLKWFH REQNRIRLQP ANPNMAPIFV
GPDKDVSIVG KVIGIYRQLE