Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_0085 |
Symbol | |
ID | 4573596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 101720 |
End bp | 102625 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639754128 |
Product | diguanylate cyclase with PAS/PAC sensor |
Protein accession | YP_899783 |
Protein GI | 118578533 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGCAGA GGGAGTTCAC CCAGATCTTC GATACCGTCA ACATCGGATT GGTGATCCTG GACCGGGAGA TGCGGGTGTG CCACTGGAAT CGCTGGATGG CGACGCGCAG CGGTATCTCC GCCGACAAAA TCATTGACCA GTCGCTGTTC GATTTTTTCC CGCACCTGAA AACCCCCACC TTCAACAAGA ACTGCATGGC GGTTCTCTCC TTTGGCAACT TCGCCTTCTT CTCCCAGAAG CTGCACCGCT ACCTGTTTCC CTTCAAGCCG GACAGTTACT TCGGCTGTCA CTTCGACCTC ATGCAGCAGA GTTGCACCAT GGGTCCACTG CGGGACGAAG ACAACGCCAT CACCAGCCTG TTCCTGATCG TTCAGGACGT GACCGAACTG GCCACCTACG AGCAGAAGCT GATCGAGATG AACACCGTCG ACGCCCTGAC CGGCGTCTAT AACCGCAGGT TCCTGGAATC GCGCCTGAAA GAGGAGTGCG ACCGATACGG CAGATACTCG CGGCCGTTCA GCCTGATGAT GATCGACATC GACTTCTTCA AGAAGGTGAA TGACACCCAC GGTCACCAGG GGGGTGACCT GGTGCTGAAA AACGTGGCCG CCGGGGCAGC GGCCATGATC AGGAAAAGCG ACTTCCTTGC CCGCTACGGA GGGGAGGAGT TCTGCTGCCT GCTTCCGGAA ACCGACTGCG ACGCGGCCGA AACCGTGGCG GAACATCTGA GGGCGCATAT CGAAAACATG GAACACCTTT TCCAGAAAAA GGTCATCAGG GTCACCATCA GCCTGGGCAT CGCCTGTTTC GCGCCCGACG ACTCGCCGGA AACCCTGGTC AAGCGGGCCG ACGAGGCGCT CTACCAGGCC AAGCGCAGCG GCCGCAACCG CTTCGTCAGG TTCTGA
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Protein sequence | MRQREFTQIF DTVNIGLVIL DREMRVCHWN RWMATRSGIS ADKIIDQSLF DFFPHLKTPT FNKNCMAVLS FGNFAFFSQK LHRYLFPFKP DSYFGCHFDL MQQSCTMGPL RDEDNAITSL FLIVQDVTEL ATYEQKLIEM NTVDALTGVY NRRFLESRLK EECDRYGRYS RPFSLMMIDI DFFKKVNDTH GHQGGDLVLK NVAAGAAAMI RKSDFLARYG GEEFCCLLPE TDCDAAETVA EHLRAHIENM EHLFQKKVIR VTISLGIACF APDDSPETLV KRADEALYQA KRSGRNRFVR F
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