| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3769 |
|---|
| Symbol | |
|---|
| ID | 4571357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | - |
|---|
| Start bp | 144094 |
|---|
| End bp | 144480 |
|---|
| Gene Length | 387 bp |
|---|
| Protein Length | 128 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639753956 |
|---|
| Product | type IV secretory protease |
|---|
| Protein accession | YP_899611 |
|---|
| Protein GI | 118577371 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCATCA CCAAATCTCT GAGCCACAGA CTGTATTGGC TTGATAAAGA CACTGCAAAG
ATAAAGTACG GCGACTACGT TCTTTTTAGG CACAGCGACG TTGCAACACA GTTTATAGAG
CAAACAATGA TAAAACTGGT GAAATGCGAC GAAGGTGATG TGCTTACAGT AAATGAAAAA
AAAGAGCTTT ACTGTAACAA TGCATTTATT GGTCGAGCAA AAGATAAGGC TCTGAATGGA
AAAAAGCTTG TCAACTTCGT CTGGAACGGT CCAGTTCCTC CGGGAATGTT CTTACCGATG
GGTGACCATA AAGATTCATA CGATGGCAGG TACTACGGAT TTTTGCCGAA AAGCAAAGTT
TTGAAAAAAG CTCACCCAGT ATTTTGA
|
|---|
| Protein sequence | MSITKSLSHR LYWLDKDTAK IKYGDYVLFR HSDVATQFIE QTMIKLVKCD EGDVLTVNEK
KELYCNNAFI GRAKDKALNG KKLVNFVWNG PVPPGMFLPM GDHKDSYDGR YYGFLPKSKV
LKKAHPVF
|
|---|
| |