| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3744 |
|---|
| Symbol | |
|---|
| ID | 4571417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | - |
|---|
| Start bp | 122185 |
|---|
| End bp | 122736 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639753933 |
|---|
| Product | nuclease |
|---|
| Protein accession | YP_899588 |
|---|
| Protein GI | 118577348 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1525] Micrococcal nuclease (thermonuclease) homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000150292 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTTT TGGGTCTTTT GAGCATGTTG TTTCTCGCTG TTTCAACTTC TGCCTGGGCC
GGCGGTCCGC TTCGGACTGT TGAAGGCGTT GTTACCAAGG TATCTGATGG TGATACGCTT
CAGGTTGCGG ATCGTATGGG AACAAAGATA AAAGTCAGGA TGTACGGCAT CGATGCCCCA
GAGACGCAGA AGGGAAACAA AAGGACGGGC ACGGTGAGCA AGCCTGGCCA GCCATATGGC
GAGGAGTCCT TTCGTGCCTT GTACTCTCTG GTGAATGGAC AGCACGTGCG GCTGGATCTG
ATGGATGTTG ATCAGTACGG TCGAACGGTC TCGATCGTCT GGTTGGGGCG GCGAAATATC
AACCGCGAAA TGGTGGCCAC AGGAAACGCC TGGGCATATC GGCAATATCT TGATCGGCCG
CATGCATCTG AGTTCATCGA TGCAGAGGAG CGGGCCAGAA AAGCCCGGCT TGGCTTGTGG
AGGCAAGGCA AGCCTCAGCC TCCCTGGGAG TTCAGGAAAA GTTTGAAAAG ACCGAAAAAT
AGCTGGTGGT GA
|
|---|
| Protein sequence | MRFLGLLSML FLAVSTSAWA GGPLRTVEGV VTKVSDGDTL QVADRMGTKI KVRMYGIDAP
ETQKGNKRTG TVSKPGQPYG EESFRALYSL VNGQHVRLDL MDVDQYGRTV SIVWLGRRNI
NREMVATGNA WAYRQYLDRP HASEFIDAEE RARKARLGLW RQGKPQPPWE FRKSLKRPKN
SWW
|
|---|
| |