| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3732 |
|---|
| Symbol | |
|---|
| ID | 4571339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008607 |
|---|
| Strand | + |
|---|
| Start bp | 111637 |
|---|
| End bp | 113625 |
|---|
| Gene Length | 1989 bp |
|---|
| Protein Length | 662 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 639753921 |
|---|
| Product | von Willebrand factor, type A |
|---|
| Protein accession | YP_899576 |
|---|
| Protein GI | 118577336 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.770255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAG ACAAGGAACT TGTCGGACTC TGCCAGGTAA TCGCTCGCGA TTCCGGCATG
GAAGTCACCA TTGGAGGAAA CTCCTCTTAC ATTTCAAATG ACGGCAATCG GCTGAACATC
GCAGCCATGC CAATAACCCC AGAAGGTCGA ATGGTCGCTG TTGGGCTTGG CTTCCACGAA
GTGGGACACA AGCTCTACAC TGACATTTGC GGCGGGCCTG GTTCAGGTTT GCTGGGCGAC
CTCACCAACA TCATCGAAGA CGTTCGGGAA GAGCGGGATT TTGTTAAAGA CCGCCCGGGC
GCTTCGTATG ACCTCAGAGC TGTCACTGAC TGGTATCAGG CACGAGGAAA CTACACACCG
ACGGATATGC AGACAGCATT CCGATGCCTT GTTCTATGCA CCGGATATTC GGCTGTGCTT
GGATTCTCCT CGGTGCTTCC TGACCTTGCC AAAGCCGAGG AAATCATCTC CAAAGAAATG
GGAGGTGGCT TCCTGTCGTT GGCTAAGTTG ATCCTGCAGC ATTTTCCTTC ACTTCCCTAC
GGAAAAGAAG GGACTGCCGA ATCCAAGGAG ATGGCGATAG CCCTTTGTAA GCTCCTTGAA
GATGAGGCAA AGAAGAAGGA GCAGGAACAA CAAGATCCGA CCAGCCAAGA CAACCAGCAG
GATGATTCGC AAGGATCACC AGAGGACAAA CAAAACAAGG AGGATGACAA TCCCGAGAAA
CAAAACCAGG ACGAGGAGCA AAGCGGTTCA AACGATAAAT CCTCCGAGTC CAACAACAAC
AATGGAGACC AGGATGAGAA CAACCCATCT GGTGATCAAT CCTCAGACAA CAGAGATAAC
CCGTCACAGG ATAACCACAC AGATCAGGGC GGCCAGGACG AAGACAGCGA GCAAAACGGT
TCTGGCAAAA ACCCCTCTAA GTCCGACACA GACGATGAGG AAGGTGATGG AAACGATGCC
GGCAACGACA ATGGTTCCAG CTCCTCCCCT TCCGATGACT CCACAACACC CAACAATAAC
AGTATCGCCT CTGGCAACTC TATTGGCGGT CAAAAGGAGG ATTCAAAAAC ACAACTCTCC
GCGAGAGAAA TCATGCAGAT CCTGGAAGGC GAAAGTGACT TTGGGGATGT CCAGAAAATA
GCCCTGAAGG AACTTGAGCG TATGTCACAA GAAGTGTCTG ATGACGTACG GTCAAGCATT
CCGCAACTTC CGAGGTCGAA ACGCTTCGAT TCTGATACCA ACTTGATAGA TGAAAACGTG
GCTATCTCAG CAACGTCGAG AATGCGAGCC AAACTCATGG GGATGTTGCA ATCTGTCAAA
CAGCAACCGG AACGCTTTGG CACTTCTGGG CGCAAACTGG CTGTCAACCG TCTTGTCAAC
ATGGCAACCG GTGATCCCCG CATCTTCAAG AAACGAACAG AAACCGTAAG CATCAACACC
GCTGTAGTTA TCATGGTGGA TAATTCAGGA TCCATGACTA CAAATCGACG CATTGAAATT
GCTCGGGACT CGTCTTTTGC GCTTCACCAT ACCTTGAAAG GGATTGGTGG GGTTAGTGTC
CTGTCTGCTG CTTTTGATGC ATCATCATTG GACCCACGCA ACCCGGATTC ATTTCCGATC
AAGATTCTAT GTGGGTGGAA CGAGAAACCC TTTCCAATGC AGTTTTCAAT TCGCCCTGGT
GACATCACAC CAACGCCTTG GGCATTATGG TTCGCCCGGG CACATCTTCT ACAACGTCCT
GAGCCACGGA AGATATGTCT CATTATCACC GATGGCGAAC CTTTTGGCTG GGACAATATT
GAATCCGACA CAGTGGCAGC CACAAAGCGA CTAGAAAAGG ACCGCATTGA GATTGCTGCC
ATCGGAATTC AACTTGATGA TGTGGCGAAA TACTGGAAAA ACAATCGAGT GGTGAACAAT
GTCGACGATT TACCCCAGGC AATGTTCGGG GTAATGAACG ACCTGCTCAC GCGCAAACCC
AACACCTAA
|
|---|
| Protein sequence | MIRDKELVGL CQVIARDSGM EVTIGGNSSY ISNDGNRLNI AAMPITPEGR MVAVGLGFHE
VGHKLYTDIC GGPGSGLLGD LTNIIEDVRE ERDFVKDRPG ASYDLRAVTD WYQARGNYTP
TDMQTAFRCL VLCTGYSAVL GFSSVLPDLA KAEEIISKEM GGGFLSLAKL ILQHFPSLPY
GKEGTAESKE MAIALCKLLE DEAKKKEQEQ QDPTSQDNQQ DDSQGSPEDK QNKEDDNPEK
QNQDEEQSGS NDKSSESNNN NGDQDENNPS GDQSSDNRDN PSQDNHTDQG GQDEDSEQNG
SGKNPSKSDT DDEEGDGNDA GNDNGSSSSP SDDSTTPNNN SIASGNSIGG QKEDSKTQLS
AREIMQILEG ESDFGDVQKI ALKELERMSQ EVSDDVRSSI PQLPRSKRFD SDTNLIDENV
AISATSRMRA KLMGMLQSVK QQPERFGTSG RKLAVNRLVN MATGDPRIFK KRTETVSINT
AVVIMVDNSG SMTTNRRIEI ARDSSFALHH TLKGIGGVSV LSAAFDASSL DPRNPDSFPI
KILCGWNEKP FPMQFSIRPG DITPTPWALW FARAHLLQRP EPRKICLIIT DGEPFGWDNI
ESDTVAATKR LEKDRIEIAA IGIQLDDVAK YWKNNRVVNN VDDLPQAMFG VMNDLLTRKP
NT
|
|---|
| |