Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1248 |
Symbol | serA |
ID | 4539525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1235685 |
End bp | 1237262 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 639746617 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_892404 |
Protein GI | 118474999 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAG TTATAGTTTG CGATGCAATA CATCCGGTTG GTTTTGAGCT ATTAAATGCG CAGAGCGATT TGCGTGTAAT TGATGCAGTA GATCTGCCTA AAGATAAACT TTTAGATATT TTACCTCAGG CCGATGTGGC AATCACTAGA AGTTCTACTG ATTGCGGTGA TAAATTTATC GCGGCTTGTA AGAATTTAAA AGCGCTTGTT AGGGCTGGAG TAGGCGTAGA TAATGTAGAT ATAGACGGCT GTTCTAAAAA AGGGATTATC GTAATGAATG TCCCTACGGC AAACACTATA GCCGCAGTTG AAATGACTAT GTGCCACTTA TTAAATAGTG CAAGAAAATA TATAAATTCA GTTAATGATT TGCAGCAAAA CAGAACTTGG AAACGAGAAA AATGGTACGG AAATGAGCTC TACGGAAAGA CTCTTGGCGT AATCGGATTT GGAAATATAG GCTCAAGAGT AGCTTTTAGA AGTCTTGCTT TTGGTATGAA AGTTATAGCT TATGATCCAT ATATCGATCC TAGTAAAGCT ACTGATATGG GCGTTACTTA TACTATGAAT TTCGATGATA TTTTAGTATG TGATTTTATT ACTATCCATA CTCCAAAAAA TAAAGAAACA GTAGATATGA TCGGTGACGA AGAGATCTCT AAAATGAAAA ATGGAGTTCG TTTGATAAAC TGTGCTAGGG GAGGACTGTA TAACGAAGAT TCGCTTTTAA AAGGTTTACA AAGCGGAAAG ATATCTTACG CAGGGATTGA TGTATTTGTT AAAGAACCTG CTATAAACCA TCCTTTGCTT GATCTTGAAA ATGTAAGTGC TACTCCTCAT CTCGGTGCAA ATACATACGA ATCTCAAAAA AATATAGCGA TTGCGGCAGC CGAACAAGCT ATAAGCGCAG CTAAAGGAAT TTGTTACCCA AATGCGCTAA ATTTGCCTAT CAAAACAGAA GATTTACCTC CTTTTGTTGC TCCTTATGTA GAGCTTATAT CTAAAATGTC ATACTTTGGA GCCCAGTTAA ATAAAAAACC TATAAAAGCT ATTAGGATAG AGGCCGAAGG ATCTATCGCA GAGTATGCAA ATTCAATGCT TACTTTTGCT ATAGTTGGTT GCCTTAAAGA GACTTTGGGC GATACTATAA ATTATGTAAA TGCTAAATTT AAAGCCGAAG AAAAAGGCGT CGAAGTATCT GCAACTACTT TACCAGAAAG CGGATACAAA AACAAATTAA CAGTTAAAAT CATAACAGAT AAAGATGCTA CTGCCATAAG CGGAACTGTT TTTGGCGAGA CTGAACAAAG AATAGTAAAT GTTAATGGAT TTAAGACTGA TTTTAAGCCA AAAGGCAGAA TGATAGTATT TAAAAATACA GATGTACCAG GCGTTATCAG CTCTATCAGC TCTATATTGG CCGAAGAGAA AATAAATATA GCAGACTTTA GGCTTGGTCG CGATGATAAT GGTTTTGCTT TGGCGGTTAT ATTAGTCGAC GATGATATTA AAAAAGATAT TTTAGCAAAG CTAAATGCAC TAGAAACTTG TGTTTGGGCT GAATACGCAG TATTATAA
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Protein sequence | MKTVIVCDAI HPVGFELLNA QSDLRVIDAV DLPKDKLLDI LPQADVAITR SSTDCGDKFI AACKNLKALV RAGVGVDNVD IDGCSKKGII VMNVPTANTI AAVEMTMCHL LNSARKYINS VNDLQQNRTW KREKWYGNEL YGKTLGVIGF GNIGSRVAFR SLAFGMKVIA YDPYIDPSKA TDMGVTYTMN FDDILVCDFI TIHTPKNKET VDMIGDEEIS KMKNGVRLIN CARGGLYNED SLLKGLQSGK ISYAGIDVFV KEPAINHPLL DLENVSATPH LGANTYESQK NIAIAAAEQA ISAAKGICYP NALNLPIKTE DLPPFVAPYV ELISKMSYFG AQLNKKPIKA IRIEAEGSIA EYANSMLTFA IVGCLKETLG DTINYVNAKF KAEEKGVEVS ATTLPESGYK NKLTVKIITD KDATAISGTV FGETEQRIVN VNGFKTDFKP KGRMIVFKNT DVPGVISSIS SILAEEKINI ADFRLGRDDN GFALAVILVD DDIKKDILAK LNALETCVWA EYAVL
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