Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_1164 |
Symbol | |
ID | 4538589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 1151812 |
End bp | 1152606 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639746534 |
Product | bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein |
Protein accession | YP_892322 |
Protein GI | 118475479 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00378552 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAT TTGTAAAAGG TTTGCTGATT TTGGGCACAG GACTTGTATT TGCGGCGTGC AGCTCAAATA CGAGTAGCGA CTCTAAAGAG GCAAATTCAA ACTTAGAAAA TATAAAATCA AAAGGTATTT TCACAGCCGG AGTAAAAGAC GATGTTCCTG GTTTCGGGCT TTTAAATAAG CAAACTGGAA AGATAGAAGG CTTTGAGATT GACATAGCAA AACTTTTATC AAAACATATT TTGGGTGATG AAAATAAAGT TAAATTGGTT TCTGTTACAG CAAAAACAAG AGGACCTATG CTAGATAACA GTACGTTAGA TGCCGTTATA GCCACATTTA CTATAACAGA TGAGCGCAAG AAGACATATG ATTATACAAC TCCGTATTAT AAAGATGCAG TAGGTCTTTT AGTAAGAAAA GATGGCGGTG TAAACACTCT AAAAGATCTT GAAGGCGGGA CAATAGGAGT TTCTATGAGT TCTACTAGCA AAAAGAGTAT TTTAGAAGCC GCTAAAAATC TTGGAATAGA GCTTAAATTT AATGAATATC CAGATTATCC TTCTATAAAA GCCGCTCTTG ATGCAAAAAG AATAGACGCA TTTAGCGTTG ATAAATCTAT ACTTTTGGGA TATATCGATG ATAATAGTGT TATTTTAGAT GAGAGTTTTG CTCCTCAAGA ATACGGCATA GCTACTAGAA AAAATGATCC TGAGTTTTCA AAATACGTTG ATGAGTTTGT AATAGCAAAT AAATCTCAGA TTGATGAATT GGCAAAAAAA TGGGGTCTTA AGTAA
|
Protein sequence | MNKFVKGLLI LGTGLVFAAC SSNTSSDSKE ANSNLENIKS KGIFTAGVKD DVPGFGLLNK QTGKIEGFEI DIAKLLSKHI LGDENKVKLV SVTAKTRGPM LDNSTLDAVI ATFTITDERK KTYDYTTPYY KDAVGLLVRK DGGVNTLKDL EGGTIGVSMS STSKKSILEA AKNLGIELKF NEYPDYPSIK AALDAKRIDA FSVDKSILLG YIDDNSVILD ESFAPQEYGI ATRKNDPEFS KYVDEFVIAN KSQIDELAKK WGLK
|
| |