| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_1129 |
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| Symbol | |
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| ID | 4539427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 1121533 |
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| End bp | 1123461 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 639746499 |
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| Product | ribonuclease R |
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| Protein accession | YP_892287 |
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| Protein GI | 118474787 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGAGT TTTTAAACGC CCTTGTAAAC GGCGTAGATG ATAAATTTAT AAAAATAGAC
GAACGAGAAA TTCTGCGCGT ACTAGAACAG ATAAAAGCTG TTAAAAAGCA TAAAAACAAA
TATTACCTAA ACGATGGATA TGTCTGCGGT AAGCTTGATA TAAGTAGTGG AGGCACAGGA
TTTTTGATGC CATACGATGT GCGTTTTAAA CAAGATATAA TAATAGAAAA TCGAGATTTA
AACGGTGCTC ATTTTGGAGA TATAGTACTA TCAAAATTAA CAAAATCTAA AAAATCCAGA
CTACACGCAA CCATGATAGC GGTTTTGGCT ATGGCAAATG AAACAAGCGT AGTTTATACT
AAGCAATTCG GTCAAGTCAT AATGGGAGTA AGCATCCCAA ATTCTCTTAC TATAGCACTT
AAAGCCAGCC AAAAATCATT AAAAGAACTA CCAATAGGAA CTGTTTTAAA AATCAACAAT
CTAGATAATG ATATAACAGA AGTTTTAGGC GTATTAAGCG ATCCATCAGT AGATGAAAAA
ATATCATTAG CAATCTACAA TAAAAAAAAT CTTTTCCCCA AAATATGCGA AAACGAAGCA
AAAAGTTTTG GAGATAACGT AGATAAAAGT ATGTATCCCA ATAGAGTAGA TTTAACAAAT
TTACCGTTTT GCACGATAGA TCCGGTTGAT GCAAAAGATT TTGACGATGC TATTTATTAT
GACGTAAAAA ATCGAACCGT ATATGTAGCT ATAGCCGATG TTAGCGAATA CGTAGCCGCT
TATAGCGGTA TAGATAAAGA GGCTAAATTT AGAGGATTTT CAATCTATTT TCCTCATATC
GCCATTCCTA TGTTGCCAAG ATCACTTAGT GAAAATATCT GCTCTTTAAA ACCAAATTGC
GATAGGTTGG CTTTTGTATT TAAAATATCT TTAGATGAGA ATTTAGAGTC TATAAAAGAG
GAACTTTTTG AAGCTGTTAT TCACTCTAGA AAACGGTTTA ATTATGATGA AGTAGATGAA
ATTTTAGCTT TAAATTTAAA AACAGATGAT GAGATACAAG AGTGGATTTT GCCGCTATTT
GAGACTGCTA AAAAGCTGAA ATTTAAAAGA TTACAAAACG GATTTGATTT TAGAAGCAAA
GAGCTTAGAA TGAGTATTTC TACAAATGGA GATATCTTAA AAACAACGTA TGAAAAAGAG
ACTCCTTCTC ACTCTCTTAT AGAAGATTGT ATGCTTTTAG CAAATAAAGC CGCTGCAAAA
AGAATAAATC ACGGTATATT TAGAAACCAC GCTCCAGCCG ATCTTAAAAA AATAAACACG
CTTTTAGATG ATCTAGCAGC TCTTGGCATA GAAATTACTT ATGAAAGTGA TTTAGTAGCG
CTAATATCTA AAATCCAAAC TCAAGCAGAT AGTTTAAATA TCAGAGAAGA TGTTGATAAA
CTCATCATAA AAGCACAAAA AAGAGCAGAA TATGCAAGTA AGCCTACCGG ACATTTTGGT
TTAGGATTTG ATCTGTATTC TCATTTTACA AGTCCGATTA GACGTTATTC TGATCTTATT
TTACATAGAC TTTTAAAAGC AAATTTAGAG AATAATGCGA AACTTTTTAA CTATCTCCTT
TTGGATATAG AAGGAGTTTG CAGGGGATTA AACGAACTTG AACGTGAAGC CGATAGAGTA
GCGTGGGATT TTATGGATAG AAAATTTGCA AGATGGGCTA CAAATAATAT CAATAAAGTA
TTTCGCTGCT ACATAAGCGA AGTTGGCAAC CAAACAATAG CTAAATTAGA CGATGAAATA
AAAGGAGCTA GAATATACAT AGAAAACTTT ACTTGTTCAC TTCTTGCTTC TGTTATGGTG
CAGATAAAAG AAGTAGATAT ACCAAGTGCA AAAATTATAG GAAAAGTAGT ACAAAAACTA
GATGTATAA
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| Protein sequence | MKEFLNALVN GVDDKFIKID EREILRVLEQ IKAVKKHKNK YYLNDGYVCG KLDISSGGTG
FLMPYDVRFK QDIIIENRDL NGAHFGDIVL SKLTKSKKSR LHATMIAVLA MANETSVVYT
KQFGQVIMGV SIPNSLTIAL KASQKSLKEL PIGTVLKINN LDNDITEVLG VLSDPSVDEK
ISLAIYNKKN LFPKICENEA KSFGDNVDKS MYPNRVDLTN LPFCTIDPVD AKDFDDAIYY
DVKNRTVYVA IADVSEYVAA YSGIDKEAKF RGFSIYFPHI AIPMLPRSLS ENICSLKPNC
DRLAFVFKIS LDENLESIKE ELFEAVIHSR KRFNYDEVDE ILALNLKTDD EIQEWILPLF
ETAKKLKFKR LQNGFDFRSK ELRMSISTNG DILKTTYEKE TPSHSLIEDC MLLANKAAAK
RINHGIFRNH APADLKKINT LLDDLAALGI EITYESDLVA LISKIQTQAD SLNIREDVDK
LIIKAQKRAE YASKPTGHFG LGFDLYSHFT SPIRRYSDLI LHRLLKANLE NNAKLFNYLL
LDIEGVCRGL NELEREADRV AWDFMDRKFA RWATNNINKV FRCYISEVGN QTIAKLDDEI
KGARIYIENF TCSLLASVMV QIKEVDIPSA KIIGKVVQKL DV
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