Gene CFF8240_1036 details

Gene Information

• Locus tag: CFF8240_1036
• Symbol: rimM
• ID: 4538078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter fetus subsp. fetus 82-40
• Kingdom: Bacteria
• Replicon accession: NC_008599
• Strand: -
• Start bp: 1037315
• End bp: 1037845
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 639746411
• Product: 16S rRNA processing protein RimM
• Protein accession: YP_892200
• Protein GI: 118474549
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 0.145928
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAGAGTG ATTTTGTAGA GGTTTGCATA CTTGGAAAGA CTGTTGGTTT AAAAGGGGCT 
TTAAAGCTCC ATGACCGCAG TGATTTTCCT AATCAATTTA AAAATGGTGC TAAATTCTAT 
GATATAAATA GTAAAGAATT TGTCATAAAA AGTTATGATA GAAATAACAA TCTGGTAATT 
TTTGAAAATT ATGATAGCAT AGATCTTGCT AAAACGCTTG TGAATTATAT CTTATACAGA 
AGTATTAATG ATACTATAAG AGATTGTAAG CTCGCAAAAG ATGAATTTTT CTATTTTGAT 
ATCATAGGTT GTAATGTTTT TGAAGATAAA ATTTTGCTCG GAGAGGTAAT AGATATATTA 
GAAGTTGGAG CTGGATTTTT ATTCAGTATA AAAACAGAGG GCGATCTCGT AAAAGCCGGT 
TTAAATTCCA ATTTTTATAT ACCTTACAAT GATAATTTTA CTCAAAATAT AGATATAAAA 
TCTAAAAAAA TTCAGGTTAA AAATTCGTTA GATATATTAA AAAATTCATA A 

 

Protein sequence

MKSDFVEVCI LGKTVGLKGA LKLHDRSDFP NQFKNGAKFY DINSKEFVIK SYDRNNNLVI 
FENYDSIDLA KTLVNYILYR SINDTIRDCK LAKDEFFYFD IIGCNVFEDK ILLGEVIDIL 
EVGAGFLFSI KTEGDLVKAG LNSNFYIPYN DNFTQNIDIK SKKIQVKNSL DILKNS