Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0843 |
Symbol | |
ID | 4537907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | + |
Start bp | 849810 |
End bp | 850874 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 639746229 |
Product | phage integrase family site specific recombinase |
Protein accession | YP_892018 |
Protein GI | 118474094 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00824905 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAATATA AATTAGACTG TAAAGAGAGT TTTGAAAGCT CATTTTTGTT TTGGCTGACT CGTTTTGTAA AATACAAGCT AAACTCACTC TCAAACAAAG AGCTCAAAGA TCAAGCTGCT TTGGCTAGCG TGAATTACGC ACTTACAAAA GGAGTTGCAA ACATAGATGA GCTTGATGGT TTTGTAAAAA AAGCCAGAAA CGCTGGACTT ACTGGTATAA ATACGTATTT TAATCCGTTA AAAAAGATTT ACGAAGTGCT TAAATTTTAT GAACTCACAA GTTTAGCTGT GATCGATGAA GAGCTTATAA GCGAAGTTCT AGCAAGTATC ACAGGAAGTC TCAGTGATGC TAGCAAAAAA AATTACCGAA TCGCTGCGAT AAACTTTTTT GAGTTTATAG GAAAACAAAA CGAGGAAGAC GGTAAGGCGC ATATTTTTGA TATCGAGCTT AAAAACTGGG GTGGAGTTAG TGGAAATAAA GGTCAAAAAC TTCCTGAGTT TATGAATGAA GAAGAGGTTA AAAGGTTTTT AAATGCCATT GATGAGACGG ATTTTAAAAT GAATTCAAAT CGAAATAAAC TAATCATCAA AACCATTGTT TTTACCGGAA TTCGTGTAAG CGAGGCTCTA AATTTAAAAA GAAAAGATAT TAGTGAAGAC GGCGATCTTT ATATCCTTAG GATACGAGGC AAAGGCAATA AATATCGTAT TGTGATGATA AAAAAACATC TTATAGATGA ACATCTACAA AATATAGTAA TAAACTATAT AAATAGCGAA GGATATCTTT TTGTAAATAG AAACGGAGAG AAGCTAACTC AAGCTTATGT AAGTCGCATT GTTGAGCAGA TTTTATTTGG TGCTGGTATC AGAAAAGAGA AAAACGGCGC GCATATGCTT CGTCATACGT TTGCGACTAT GCTTTACAAA AAACAAAAAG ATCTGGTTTT AGTTCAAGAA GCCCTTGGCC ACGCTAGTTT AAATACTTCT AGGATATATA CTCACTTCGA TAGTGATAAG CTAAAATTAG CCGCTAAAGT CGCAGAAGAT CTAAACGATA ACTAA
|
Protein sequence | MKYKLDCKES FESSFLFWLT RFVKYKLNSL SNKELKDQAA LASVNYALTK GVANIDELDG FVKKARNAGL TGINTYFNPL KKIYEVLKFY ELTSLAVIDE ELISEVLASI TGSLSDASKK NYRIAAINFF EFIGKQNEED GKAHIFDIEL KNWGGVSGNK GQKLPEFMNE EEVKRFLNAI DETDFKMNSN RNKLIIKTIV FTGIRVSEAL NLKRKDISED GDLYILRIRG KGNKYRIVMI KKHLIDEHLQ NIVINYINSE GYLFVNRNGE KLTQAYVSRI VEQILFGAGI RKEKNGAHML RHTFATMLYK KQKDLVLVQE ALGHASLNTS RIYTHFDSDK LKLAAKVAED LNDN
|
| |