Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0650 |
Symbol | |
ID | 4539267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 660498 |
End bp | 661559 |
Gene Length | 1062 bp |
Protein Length | 353 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 639746036 |
Product | phage portal protein |
Protein accession | YP_891825 |
Protein GI | 118474711 |
COG category | [R] General function prediction only |
COG ID | [COG5518] Bacteriophage capsid portal protein |
TIGRFAM ID | [TIGR01537] phage portal protein, HK97 family [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAGAT TTTTTATAGA AAAAGACGCA AAACAAAGTT TGCAAATAGG AGAAGAGACT ACCTCCACAA GCGGGATTAT AGAGCCATTT TTTAGTTTTA ACCAACTTTT AGAAGCATAT TACGCAAATG TTTATCACAG GCGTGCTATA AAGATAAAAG CAGGTCTTTT AAGCCAAATA GAAACAGAAG AAAGCGACTT AGAAAAGTTC TTACCTGCAG GTGTAAGCCC TAAAAACTTC CTAAACACAT TTGCTTTTAA CTTAGAACTC TATGGAAACG CCGCCATAGA AAAAGCAGGC GGGAGTACCA GCTACCTTTT TTACAATCTC CCAGCAAACC AAATGCGGCT TAAAAAAGAT AGGCGCCTAT TTCAAAAAGT GAATGAAAAG ATTGTGGAAC TAGAGGGATA CCATTTTTTT TACTACAGTC CAAATAGCAG GTATTATGGC GAACCAGACT ACCTAGCAGC TTTACAACAA ATCCTAATAA ACCAAAAAGC AGATCTGTAT AATGATAAGT TTTTTGATAA TGGAGCAAGA CCAGACCTTG CCATAATTTA TGAAAACGCA GAGCCAAGCG AGGAGCAAAT AAAGGCGTTT GAAAATTTTT TTGGTAGCAA TTTTAGAGGT TATAACAACT CACACAAGAC CCTTATAATT TATGGAGAAA ACAGTGCAAA TGACAAAGAC GCTAAAATCC GCTTTGAAGA GCTAGGAAGG GTAAGTGATC TTAGCTTCAA AGAGTTAAAA AGCGTAACTA GGGATGAAAT AGCAGTCGCT CACGCCATTC CTCCGCGTCT TTTAGGCATA GTACAAGGCT CTGCTCTTGG CGGTAGTGGT GAGCTAAGCG GTCAGCTCCA AATGTTTAAT GAGCTTGAGA TAAAACCAAA AATAGAGATG ATAGAGCAAT TTTTTTCAAA TATTGGGATA AAGGTAGTAT TAAAGGCTAT GGATACTACA AGCTTCAAAG ATGATGGAGA GATAATGACA ACCCTTGTAG GAAGTGGGAT ATTAAGCGTT GAAGAAGCTA GAAGTATATT AGGGTGGCAA AAGAATATTT AA
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Protein sequence | MNRFFIEKDA KQSLQIGEET TSTSGIIEPF FSFNQLLEAY YANVYHRRAI KIKAGLLSQI ETEESDLEKF LPAGVSPKNF LNTFAFNLEL YGNAAIEKAG GSTSYLFYNL PANQMRLKKD RRLFQKVNEK IVELEGYHFF YYSPNSRYYG EPDYLAALQQ ILINQKADLY NDKFFDNGAR PDLAIIYENA EPSEEQIKAF ENFFGSNFRG YNNSHKTLII YGENSANDKD AKIRFEELGR VSDLSFKELK SVTRDEIAVA HAIPPRLLGI VQGSALGGSG ELSGQLQMFN ELEIKPKIEM IEQFFSNIGI KVVLKAMDTT SFKDDGEIMT TLVGSGILSV EEARSILGWQ KNI
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