| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0555 |
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| Symbol | trmE |
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| ID | 4538711 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter fetus subsp. fetus 82-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008599 |
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| Strand | + |
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| Start bp | 560877 |
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| End bp | 562193 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 639745942 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_891745 |
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| Protein GI | 118474837 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATAG TCGCACTTGC TAGCGCTTAT GGCGTTGGAA GTATTTCGAT AGTAAGATTA
AGCGGAGATG GCGCTTATGA TCTGGCGATA AATTTATGTA AAAAACCTCT TACTCCGCGC
TATGCTCATC TAAGAAAATT GTATTGTGAA AATATGGTTT TTTTGGATGA AGCCATAGTT
ATTTATTATA AAGCTCCATT TAGTTTTACA GGTGAGGATG TTGTGGAGTT TCAAACTCAC
GGCGGCGTTG TTGTAGCAAA TTTAATTATA GATGAACTTT TAAGGCTCGG AGCTAGAGTG
GCAAATCCCG GAGAGTTTAG TAAAAGAGCT TTTTTAAACG GCAAAATGGA TCTAGTTAAA
GCCGAAAGCA TACAAAGCCT CATAAATGCT AGAAGCGAGG GCGCGGCTAA GATTTTAGCT
AGAACAATGA ATGGAGAGCT TAGCGTTTTT GTAAATTCAT TAAGAGATGA GCTTATAAAA
ATACTTGCTT ATACCGAAAC CTGCATAGAT TACGCTGATG ATGATCTGCC TAGCGACATT
CTACATAGTT CAAAAGATCT ACTTTTAAAT TCCTACAAAA AACTAGAGCA TATTATAAAT
ATTTCAAATT CAAAAAAAGG TCTTATCGAT GGATATAAAG TAGCTATAAT CGGTAGGCCA
AATGTCGGTA AGAGTTCTAT TTTAAATTCA CTTTTACACT ATGAAAGAGC TATCACTAGC
GAGACTGCCG GTACTACTAG AGATACTATA GAAGAGCAGA TAAAATTTGG ATCTCATTTG
GTTCGTATCA TCGATACTGC GGGTATTAGA GATGAGTTTG ATAGTAGTAT AGAAGCCGCC
GGAATAGAGT ATTCAAAAAG AGCCGCAAGA GAAGCCGATA TTATATTTTG TGTATTTGAT
AGCTCACAAA AAGCTAGTTT AGAAGATAGG CAAATTTTGG AATTTATATC AAATTTAAAT
AAAAAAACTA TTTATGTATT AAACAAATCC GATTTGGAAT TTAAATTTGA TATAAGCTTA
AATGCTGTTT TAGTATCTGC TAAGCTAGAC TCTACTCCGC TTAGTAAAGA GCTTGAGTCT
TACTTAAACT CACAAGATAC AAACGATATA ATGCTAAGCT CAAATCGACA AATAGAAGCT
TCAAGGTTAG CTAGCGAGGC GATTAAAAAT GCACTTGAAT TGTTAAATGA AAGTGAGTTA
GAGTTATTTG CTTATGAATT AAATATCGCT TTAAAACATA TAGGAAGTAT AACAAAACCT
ATGGAAAATA GTGAATTATT AGACAAGATG TTTAGCAGTT TTTGCTTAGG AAAATAA
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| Protein sequence | MNIVALASAY GVGSISIVRL SGDGAYDLAI NLCKKPLTPR YAHLRKLYCE NMVFLDEAIV
IYYKAPFSFT GEDVVEFQTH GGVVVANLII DELLRLGARV ANPGEFSKRA FLNGKMDLVK
AESIQSLINA RSEGAAKILA RTMNGELSVF VNSLRDELIK ILAYTETCID YADDDLPSDI
LHSSKDLLLN SYKKLEHIIN ISNSKKGLID GYKVAIIGRP NVGKSSILNS LLHYERAITS
ETAGTTRDTI EEQIKFGSHL VRIIDTAGIR DEFDSSIEAA GIEYSKRAAR EADIIFCVFD
SSQKASLEDR QILEFISNLN KKTIYVLNKS DLEFKFDISL NAVLVSAKLD STPLSKELES
YLNSQDTNDI MLSSNRQIEA SRLASEAIKN ALELLNESEL ELFAYELNIA LKHIGSITKP
MENSELLDKM FSSFCLGK
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