Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CFF8240_0536 |
Symbol | |
ID | 4538529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter fetus subsp. fetus 82-40 |
Kingdom | Bacteria |
Replicon accession | NC_008599 |
Strand | - |
Start bp | 542240 |
End bp | 543562 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639745923 |
Product | mate efflux family protein |
Protein accession | YP_891726 |
Protein GI | 118474212 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAGAAC TAAATTTAAC GAGATTGGCA ACTCCGATAT TTTTCGATAT GCTACTTCGT ACTTTAACTC TTATTATAAA TACGATTATG GTAGCAAAAG TAGATGTAAA TTTAGTAGGA GCTATGGGAG CCGGAAATCA AATTTTCAAC CTTTTTGTAA CCGTTTTTAG CTTTCTTAGC GTAGGCTGTA GCGTAGTAGT AGCACAAAGT TTAGGAGCAA GAAAAATAAA CTTAGCAACA AGAGCCATTC ATATCAGCCT TAGTTTTAAC GGTATTTTAG GGCTTATATG TGCCGCATTT ATATTTTTAA ACACGCACAA AGCCTTAGAA CTTCTGCAAA TTCCAGTAGG AGTCATAGAA GATAGTTTCA AATACCTTCA TATACTATCT TTAGCACTGT TTTTAGAAGC CCTTGGTATA GTCATAGCTG CAATTGTAAG AGTGAAAAAT TATGCATTTG CTATAATGCT TATATCCGTA TTTATGAACA TTTTAACTAT CTTTGGAAAT GCTATAGCGC TTTTTGGACT ATTCGGGCTT CCGAATTTTG GATTAAGCGG AGTTGCTATA TCTACTATAT TTGCTAGAGG CGTGGGAATT ATACTTTTAA TGTATGTTTT AGTAAAAATA GCCAAAGTGC ATATATTTTT TGGATTATTT TTTAAATTTA GTTTAGATAT ACTTTCCAAA ATCTTAAAAG TAGGACTGCC TAGCGCCGGA GAAAATTTGC TTTGGATAGG TCAATATATG GTAGCGTTTA GTTTTGTAGC AAGCATGGGG GAAACGAGCC TTAGTGTACA AACCATATAT TTTCAGATGT CTATGTTTAT ATTTTTAGCC GCTACATCAA TAAGTCTTGC AAACGAGATA ATAATAGGTC ATTTAGTAGG AGCTTGCGAG TTTGACAAAG CTTATAAAAG AGCTTTTAAA AGCTTGAAAA TCGGGGCGCT CATTACTTGG ATAGTGCTTT TTATATTTTA TTTGAGCCGT GAGGAGATAA TGAATAGTTT AAATTTAACC GAGGAGCTAA AATCCATAAT GCGGCCTCTT TTCACGCTTT CTTTAGTGCT TGAAAGCGGC AGAACATTTA ATATTATAAT GGTAAATTCG CTAAGAGCTA GCGGAGATGC TAGGTTTCCA TTTATAATGG GAGCACTTTT TATGTGGGGA GTTTCACTTC CTATAGGATA CTATCTTGGT ATAATTTTAG AATATGGAAT AATCGGTGTT TGGATAGGAT TTTGCGTAGA TGAATGGGCA AGAGCTTTTG CAAATACTCT GCGCTGGAGA AGTAAAAAAT GGCAACTAAA ACGTCTAGTT TGA
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Protein sequence | MKELNLTRLA TPIFFDMLLR TLTLIINTIM VAKVDVNLVG AMGAGNQIFN LFVTVFSFLS VGCSVVVAQS LGARKINLAT RAIHISLSFN GILGLICAAF IFLNTHKALE LLQIPVGVIE DSFKYLHILS LALFLEALGI VIAAIVRVKN YAFAIMLISV FMNILTIFGN AIALFGLFGL PNFGLSGVAI STIFARGVGI ILLMYVLVKI AKVHIFFGLF FKFSLDILSK ILKVGLPSAG ENLLWIGQYM VAFSFVASMG ETSLSVQTIY FQMSMFIFLA ATSISLANEI IIGHLVGACE FDKAYKRAFK SLKIGALITW IVLFIFYLSR EEIMNSLNLT EELKSIMRPL FTLSLVLESG RTFNIIMVNS LRASGDARFP FIMGALFMWG VSLPIGYYLG IILEYGIIGV WIGFCVDEWA RAFANTLRWR SKKWQLKRLV
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