| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0524 |
|---|
| Symbol | |
|---|
| ID | 4537958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 530025 |
|---|
| End bp | 531938 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 639745911 |
|---|
| Product | FTR1 family iron permease |
|---|
| Protein accession | YP_891714 |
|---|
| Protein GI | 118474476 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0672] High-affinity Fe2+/Pb2+ permease |
|---|
| TIGRFAM ID | [TIGR00145] FTR1 family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.210875 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA TTCTTAAAAT TCTTTTTATA TTGCTTATAC CCTTTACTGT TCTTTTTGCA
AATTATGAAA AAGAGGCAAA AAGCATAGAA GAGATATTTA CTCAAGTTAT AGAACTTTAT
AAGAACGGTA AGGATACTGA AGCTAGAGAG CTTACTCAAA CTGCGTATTT CGGGCATTTT
GAAAATTTAG AAGGCGGTAT TAGAATAAAT CTTGGTCAAA AAAAAGCTTA CTCTATGGAA
AAACAGTTTG GAGATATAAG AAAAGCTATC AAAGCGGGTC AAGACGTCGC TAAAATAGAA
GCTATGATAG CAAATTTAAA TACCGAGATA AAAGAAGTTT TGCCTACTAT AAGTAGCGGC
GTGAAGCTCC AAGCCCAAAA GAGCGATGAC GGCGGTTTGG CTGCTGCTGG AATGAGCTCT
TCTGTCTTAG AGTCAAATCC ATGGGGTAGC GTTTATGAAA ATATAAAATC TAGTTTAGAT
GATGCTATTT TGGCTTATGA CAAAAAAGAC GGCGAAGCTC TTAAAAATGC TATGAATAAA
GCTAAATTTA ATTATTATAG AAATATGGAG CTTGAAATAG CCGTTAGAAG ATATGCCACT
CAAAGGCTAG ATCAAATGAT ACAGCAGATT ATGGGTAACG TGATATCAGA AAATGTAAAT
ATGCAAAAAA ATGCATTTGA ACAGTCTATA AAAGATATCG ACGAGCTTAT AAGCAGCGCT
ATCAATAAAC TTCCAGAAGA GTCTTATGTT TTAGCTCCTA AAATAGAAGT AGAAGAAAAA
AAAGTAGTAG ATTTTACTCC TACTGTGCAA AATATAAAAG ATAAAATGCA AAATGTACTG
TCTCTATACA AAAGCGGTAG TATAAAAGAA GCTATAAGCG AGGCCGGAGA TATATATTTT
GATGAGTATG AAGCAAGCGG TATGGAGAGT AAAATAGGGG CTATAGACAT CACGCTTAAA
ACTGCAACTG AGGCTAGTTT TAGCAAGATA GTTTCTCTTA TGAAAAGCGG AGTTAGTAGC
GATAAAGTAT CGGCAGAGCA ATACAATCTA TTCTCTTTGC TAGAAACCAG CCTTGAAAAA
AGTAGTACCG ATCTTAGCGG ATGGGCTCTT TTTATATATG CGCTTAGTAT AATTTTAAGA
GAAGGATTTG AAGCTCTCAT AATTATCTCC GCAGTAGTAG CTTATCTTAT AAAAACCGGA
AATAGTAAAC ATCTAAATAT CGTCTATAGC TCGATGATAG TGGCTATATT GCTTAGTTTT
GCTACAGCGT GGGCCGTAAA TTTAATATTT GGCTCAAATA TGGCTGCACA AAGCAGAGAG
ATAATAGAAG GTGTTGTTAT GCTTATAGCA GTCGGACTTC TATTTTATGT CGGATTTTGG
CTGCTTAGTA ACGCCGGAGC TAAAAAATGG AACCATTATA TACAAGGACA CATCACTAGT
AGCCTTACTA GCGGAGATAG TAAAGCGCTT TGGTGGACTC TATTTTTAGC AGTATATAGA
GAAGGAGCCG AAACCGTGCT ATTTTATCAA GCTCTTATAT TTGATGCACG TTCAAACGGC
GCTCTTGGTA TGGTCGGACT TGGATTTGTT GCTGGTATAG TAATACTTTT TATACTATAT
TTTATCATTA AAGCGTTCTC ATTAAAGATA GCTATAAAAC CATTTTTCAT AGCTACTTCG
GCTATTATAT TTTATATGTC GATAGTATTT GTGGGTAAAG GCGTAATGGA GCTTGTGGAA
GGAAAATTAT TTGTTCCAAA CGTTATAGAG TCTATTCCTA CTATAACTTG GTTGGGAATT
TATCCGTACT ATGAGAGTTT GATACCTCAA TTTTTGATGA TACTAGCTCT TATAATAGGA
GTATATATAA TAAAGCAAAA ACAAATCAAT CTTAATAAAG GAGAACAAGT ATGA
|
|---|
| Protein sequence | MKIILKILFI LLIPFTVLFA NYEKEAKSIE EIFTQVIELY KNGKDTEARE LTQTAYFGHF
ENLEGGIRIN LGQKKAYSME KQFGDIRKAI KAGQDVAKIE AMIANLNTEI KEVLPTISSG
VKLQAQKSDD GGLAAAGMSS SVLESNPWGS VYENIKSSLD DAILAYDKKD GEALKNAMNK
AKFNYYRNME LEIAVRRYAT QRLDQMIQQI MGNVISENVN MQKNAFEQSI KDIDELISSA
INKLPEESYV LAPKIEVEEK KVVDFTPTVQ NIKDKMQNVL SLYKSGSIKE AISEAGDIYF
DEYEASGMES KIGAIDITLK TATEASFSKI VSLMKSGVSS DKVSAEQYNL FSLLETSLEK
SSTDLSGWAL FIYALSIILR EGFEALIIIS AVVAYLIKTG NSKHLNIVYS SMIVAILLSF
ATAWAVNLIF GSNMAAQSRE IIEGVVMLIA VGLLFYVGFW LLSNAGAKKW NHYIQGHITS
SLTSGDSKAL WWTLFLAVYR EGAETVLFYQ ALIFDARSNG ALGMVGLGFV AGIVILFILY
FIIKAFSLKI AIKPFFIATS AIIFYMSIVF VGKGVMELVE GKLFVPNVIE SIPTITWLGI
YPYYESLIPQ FLMILALIIG VYIIKQKQIN LNKGEQV
|
|---|
| |