| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CFF8240_0435 |
|---|
| Symbol | |
|---|
| ID | 4539386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter fetus subsp. fetus 82-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008599 |
|---|
| Strand | + |
|---|
| Start bp | 410926 |
|---|
| End bp | 412716 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 639745828 |
|---|
| Product | TonB-dependent receptor domain-containing protein |
|---|
| Protein accession | YP_891635 |
|---|
| Protein GI | 118475320 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCATTGCCAT AGCGGTTGTT TGTGGATTTA GCTTAGCTTG TGCGAAAAAT
TTAGCAGATC CGGACGTCGC TTGGAGGATA AAGCCGTTTG GACTTCCAAA GCCGCTTACA
AACCGGTCTA TTTTAAATCC GGCGATAGAA AATAACTTCG ATTTTACTCA GCGCCAAAGC
TATTATTACG CTAATGATGT GATCGATAAA AACAGAGATG CTCTGCATAT AAGTGGCGGT
TTTATAGGTA AAAGCTACTC GGGGGCAGCT ACTTACGATA TAAAAACAGA CAACGCGGAC
GCACATATCG GGACGTATTA TCATAATCTT GGAGATTATA AAGGCGGAAA CGGCAAATAT
CAAGGCGTAG GATATGAAAG AAATGCTCAA GATTTCGGTA TAAAACTTAG ACCAAAAGAT
AATTTTAGTT TAAACTACAC TTTTATAAGA GATGAGATCA TAGACGATTT GCTTCCGTCA
AACGCTTTAG AAACGATTAG AAACACGAGA TATTTAAATA ATCTAAAAGT AAAAATAGGC
GAACAAGACA ACTCAAATAC TCTAAATTTA GGTTTTAGTT ACGGCGAGAT CAAGCGTTAT
AGAAGTAACG AATACAAACG TCTACCAAAT ATGGTCAAAT TCGATAGCAA AACAGCCACT
TACTCGTTTT TAGGCGAGTA CGCTTATAAA CTTAACGATA TGCAAAACTT TGTAGGCGTG
AGCTACAAAT CTAAAACCGA AGATGGATAC AGACGCCTTG CAAACGGAAC TATAACGGGC
TGGGGATTTC CGGGGCTTGA TATAGATAAT TATAGAGTTT ATAACACGTT TATCTATGAG
CTTAGCGAGT CTCACGCACT TAGTTTGGGA TTAAATTACG ACTGGTTTTA CAGTGACGCG
AGTAAGCTAA ACTCCAAAGT ATCAAACGGT AAAAGTCTAA ATGACGAGTA TGAGAGAATT
TACGGTGAAA GAATGAGAGA TAACGACTAT AGTGGACTTA GCGCAAAGTT AAGGTATGAT
TACAAAAATA ACGGATATAA GTCTTATTTG CAACTTGCAA GCTTATACGT TGCTCCATAC
TTGTATAATT CGCTAAATGT TTATAACTAT ATGCCAAACT CATCTCCTTA TTTATACAAT
ATAGGAGCAC CAAATTTAAA ATCATCAAGG CACAACCTAG CTCAGATCAG TAGCAGTTAT
AATGATAACG CAGGCTTTAG CTTTACTTAT GATAGCATAG AAGATCTCGT GATCTACGAT
AGGCTACGCT CAAGTGATGC AACTCTTGAT GGAACGATCA TTAGAAGAAA TGTTAATGCT
GATTATCTAA ATGCAAAAGG TTGGGTAAAG TTTGACGTCA TCGATAATCT TAGTATAAAA
TCAAGCCTGA CTTATCACTA TGGTCAAAAT AGATCAGACG ATAGACCGCT TTATCAAATT
CGCCCTATAG AGTTTAATAC AAATTTGGAT TATAAGCAAA ATACGCATTT TGGGCAGTGG
AGCGTAGGTT CGGCTTTAAG ATGGGTCGGA GCTCAAAGCA GAGGCGATTG GGATAAAAGC
ATAGGACTTG GAAGCGATCT AAAAGATAGC GCAAAAGCTT TTGCGACCGT TGATCTGTAT
AGCGGAATCA ACATAAAAAA CAGATTCGGC GTGAGATTTG GCATAGCAAA TATTTTCGAT
GAAGACTACA GTGAGTTTAT AAATCCAAAT CATTTAGACG TCATAACTCC GAGTTTTGCT
ATAAAAGCAC CAGGTAGAAC TGTTTTTATG AGTTTTAACG CTAGTTTTTA A
|
|---|
| Protein sequence | MKKIIAIAVV CGFSLACAKN LADPDVAWRI KPFGLPKPLT NRSILNPAIE NNFDFTQRQS
YYYANDVIDK NRDALHISGG FIGKSYSGAA TYDIKTDNAD AHIGTYYHNL GDYKGGNGKY
QGVGYERNAQ DFGIKLRPKD NFSLNYTFIR DEIIDDLLPS NALETIRNTR YLNNLKVKIG
EQDNSNTLNL GFSYGEIKRY RSNEYKRLPN MVKFDSKTAT YSFLGEYAYK LNDMQNFVGV
SYKSKTEDGY RRLANGTITG WGFPGLDIDN YRVYNTFIYE LSESHALSLG LNYDWFYSDA
SKLNSKVSNG KSLNDEYERI YGERMRDNDY SGLSAKLRYD YKNNGYKSYL QLASLYVAPY
LYNSLNVYNY MPNSSPYLYN IGAPNLKSSR HNLAQISSSY NDNAGFSFTY DSIEDLVIYD
RLRSSDATLD GTIIRRNVNA DYLNAKGWVK FDVIDNLSIK SSLTYHYGQN RSDDRPLYQI
RPIEFNTNLD YKQNTHFGQW SVGSALRWVG AQSRGDWDKS IGLGSDLKDS AKAFATVDLY
SGINIKNRFG VRFGIANIFD EDYSEFINPN HLDVITPSFA IKAPGRTVFM SFNASF
|
|---|
| |