Gene Acel_2038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_2038 
Symbol 
ID4486202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2310840 
End bp2311994 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content66% 
IMG OID639730834 
ProductABC transporter related 
Protein accessionYP_873796 
Protein GI117929245 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAAC CAACGGACAC GACGCCACGA CACCCGGGGC TGGACGTCCA CGCCGTCGTG 
CGACGCGACA CTTTCAGGCT GGATGCGGCC CTGTCCGTTG CACCGGGTGA AATTCTCGCC
GTCCTCGGTC CCAGCGGCGC CGGCAAGAGC ACATTGCTGC GAGCGATTGC CGGTCTGGAG
CGGTTGACCG CTGGATTCAT CGCGATCGGC GGCCGCATCG TAGACGATGC GGACCGGATC
AGGCTCAGCC CGCGGGAGCG ACAGGTCGGC TACGTTCCGC AGGATTACGT TCTCTTTCCC
CGGATGACGG TATTGGATAA CGTTGCCTTT GGTCTGCGGG CTCACGGAGT CAGAAAAGCC
GCCGCGCGAC GCCGGGCACA GCAGCTGCTG GATCGCTTCG GCGTCGGGGC GCTCGCGCAT
CGGCGTCCGA CCGAGATCTC GGGAGGTCAA GCCCAGCGCG TCGCACTCGC CCGGGCGCTC
GCCGTCGATC CAACCGTCCT TCTGCTGGAC GAGCCGCTTG CCGCCCTCGA CATTGGGACG
CGAATGAGCG TGCGGGCCGA GCTGCGGGAG ATGCTCACGA CATTTCCCGG CGGTGTCATT
GTGGTGACCC ACGACCCGAT GGATGCGTTC GTCCTGGCGG ATCACCTTGT CGTGATGGAA
TCCGGCAGGG TGGTGCAACG CGGCGCCCCG GCGGCGGTTG CATCCCATCC GCGCACGGAG
TACGTGGCAC GGCTCTGTGG GATCAATCTG CACCGGGGGG TGTGTGACGG ACGGGTGATT
CGACTCGGAA CCGGAATGGA ATGGCAGGTG GTCGACGCGC CTGTCGGTGA TGTCTTCGTC
GCCGTGCGGC CAAGCGCTGT CGCCGTGTAC CGCGAGCGGC CGGACGGCAG TCCGCGCAAC
TGTTGGAAAG CCCGCGTGAC GAGTGTGGAG GAGTACGGTC ACGTCGTCCG CCTTGGCGTG
TCACGTCCGG CGAATATGAT CGCAGATATT ACCGCCGAAT CACTCGCCCT GCTCCGGTTA
CGGGTCGGTG ATGACGCATG GTTTGCCGTC AAAGCGACCG ACCTCGTCGT ATACCCCGCG
GCAGAAGGCA GCCCATATCA CCCTGCAGAA AGCGGTGCTC AACCGTCGGA TGGCGCGACC
GGACTGGGCG TGTGA
 
Protein sequence
MPEPTDTTPR HPGLDVHAVV RRDTFRLDAA LSVAPGEILA VLGPSGAGKS TLLRAIAGLE 
RLTAGFIAIG GRIVDDADRI RLSPRERQVG YVPQDYVLFP RMTVLDNVAF GLRAHGVRKA
AARRRAQQLL DRFGVGALAH RRPTEISGGQ AQRVALARAL AVDPTVLLLD EPLAALDIGT
RMSVRAELRE MLTTFPGGVI VVTHDPMDAF VLADHLVVME SGRVVQRGAP AAVASHPRTE
YVARLCGINL HRGVCDGRVI RLGTGMEWQV VDAPVGDVFV AVRPSAVAVY RERPDGSPRN
CWKARVTSVE EYGHVVRLGV SRPANMIADI TAESLALLRL RVGDDAWFAV KATDLVVYPA
AEGSPYHPAE SGAQPSDGAT GLGV