Gene Acel_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1999 
Symbol 
ID4484936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2273730 
End bp2274215 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID639730792 
Productendoribonuclease L-PSP 
Protein accessionYP_873757 
Protein GI117929206 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGT CCACTCCGGA AGAGCGCCTC GCCGCCCTCG GCCTCCGGCT GCCGGCGGTG 
GCGCGGCCGG TTGCGGCGTA CGTGCCCGCC GTCCGGACTG GACGCTACGT GTACACCTCG
GGCCAGCTGC CCATGGTGGA CGGCGAGCTG GTCGAGACAG GCAAGGTCGG CACCGACGTG
GACGCCGAGG TCTCGCCGGA GGCGGCGCGT GCCGCCGCCC GCATCTGCGC GCTGAACGCG
CTGGCCGCGA TCCGCGACCT GATAGGCGAT CTCGCTAAGG TACGCCGGGT GGTCAAGGTG
GTCGGGTACG TCGCGAGCTC GCGAAGTTTC ACGGGCCAAC CGGGTGTCAT TAACGGCGCC
AGCGAATTGC TGACCGAGGT TTTCGGGGAT GCCGGCGCGC ACGCGAGGAG CGCGGTTGGG
GTGGCGGTCT TGCCGCTGGA CGCGCCGGTC GAAGTCGAGG TGATCGTCGA AGTCGCCGAC
GACTGA
 
Protein sequence
MTASTPEERL AALGLRLPAV ARPVAAYVPA VRTGRYVYTS GQLPMVDGEL VETGKVGTDV 
DAEVSPEAAR AAARICALNA LAAIRDLIGD LAKVRRVVKV VGYVASSRSF TGQPGVINGA
SELLTEVFGD AGAHARSAVG VAVLPLDAPV EVEVIVEVAD D